RNA–Protein interactions for RNA: ENST00000528895.5

TM9SF1-207, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-207ENST00000528895 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 DDIT4Q9NX09 232 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 LMCD1Q9NZU5 365 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 USP18Q9UMW8 372 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 PCDHA3Q9Y5H8 950 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 REV3LO60673 3130 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 TRANK1O15050 2925 aa12.29□□□□□ -0.44
TM9SF1-207ENST00000528895 SYNJ2BP-COX16A0A087WUM0 186 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 ZNF840PA6NDX5 716 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 FANCGO15287 622 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 DDX3YO15523 660 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 IRAK2O43187 625 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 TLR5O60602 858 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 SLC2A3P11169 496 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 KPNA1P52294 538 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 HDAC4P56524 1084 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 TAS2R40P59535 323 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 AMPD2Q01433 879 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 WHAMMP3Q1A5X7 153 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 BOLA3Q53S33 107 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 TJAP1Q5JTD0 557 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 C10orf120Q5SQS8 335 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 DAB2IPQ5VWQ8 1189 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 PDZD4Q76G19 769 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 BNIPLQ7Z465 357 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 CCDC50Q8IVM0 306 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 ZNF276Q8N554 614 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 MRPS31Q92665 395 aaKnown RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 KRT35Q92764 455 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 RNF34Q969K3 372 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 PSMB7Q99436 277 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 NAP1L3Q99457 506 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 ZWILCHQ9H900 591 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 RRAGDQ9NQL2 400 aaPredicted RBP12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.28□□□□□ -0.442e-6■■□□□ 14
TM9SF1-207ENST00000528895 COX16Q9P0S2 106 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 PCSK1NQ9UHG2 260 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 RASAL2Q9UJF2 1139 aa12.28□□□□□ -0.44
TM9SF1-207ENST00000528895 GREB1Q4ZG55 1949 aa12.27□□□□□ -0.44
TM9SF1-207ENST00000528895 RFXAPO00287 272 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MDM4O15151 490 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ENDOD1O94919 500 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 IGLV3-25P01717 112 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 APOEP02649 317 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PTPN2P17706 415 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PFKLP17858 780 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 DDX6P26196 483 aaKnown RBP eCLIP12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 GABRR2P28476 465 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 CCR1P32246 355 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ATP5C1P36542 298 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PAFAH1B1P43034 410 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MARCKSL1P49006 195 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 EFEMP1Q12805 493 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MTA1Q13330 715 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 KRT81Q14533 505 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 SMTNL2Q2TAL5 461 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ARHGAP15Q53QZ3 475 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 EFHC2Q5JST6 749 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 BRMS1LQ5PSV4 323 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 SH3PXD2AQ5TCZ1 1133 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 OTUD1Q5VV17 481 aaPredicted RBP12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 KLHDC10Q6PID8 442 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 FAM131BQ86XD5 332 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 CPNE8Q86YQ8 564 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 TMC8Q8IU68 726 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PSTKQ8IV42 348 aaKnown RBP12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MAP7D3Q8IWC1 876 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 EXD1Q8NHP7 514 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ADAM32Q8TC27 787 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 HSPH1Q92598 858 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 NTAN1Q96AB6 310 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 CORO1BQ9BR76 489 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PRKD2Q9BZL6 878 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ZNF334Q9HCZ1 680 aaPredicted RBP12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 PIGVQ9NUD9 493 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 OSER1Q9NX31 292 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MARCH2Q9P0N8 246 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 RNF14Q9UBS8 474 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 DNMT3LQ9UJW3 386 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 CDC23Q9UJX2 597 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 TLR6Q9Y2C9 796 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 MRFAP1Q9Y605 127 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 ATG2AQ2TAZ0 1938 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 XIRP2A4UGR9 3374 aa12.27□□□□□ -0.45
TM9SF1-207ENST00000528895 LRRD1A4D1F6 860 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 PGRMC1O00264 195 aaKnown RBP12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 CEP104O60308 925 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 TADA3O75528 432 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 RFPL2O75678 378 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 ZRANB2O95218 330 aaKnown RBP eCLIP12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 MYL4P12829 197 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 TFE3P19532 575 aaPredicted RBP12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 CXCR3P49682 368 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 PEX5P50542 639 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 COPS2P61201 443 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 SCAPQ12770 1279 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 PDK2Q15119 407 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 TRIP4Q15650 581 aaPredicted RBP12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 ERMARDQ5T6L9 678 aa12.26□□□□□ -0.45
TM9SF1-207ENST00000528895 MIB1Q86YT6 1006 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms