RNA–Protein interactions for RNA: ENST00000528840.1

PTP4A2-211, Transcript of protein tyrosine phosphatase type IVA, member 2, human

TSL 2

Gene PTP4A2, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTP4A2-211	ENST00000528840	TWNK	Q96RR1	684 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NT5C1A	Q9BXI3	368 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	KCTD10	Q9H3F6	313 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PRDM16	Q9HAZ2	1276 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	EXOC1	Q9NV70	894 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	DNAAF2	Q9NVR5	837 aa	Known RBP	11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	MTPAP	Q9NVV4	582 aa	Known RBP eCLIP	11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	NAGPA	Q9UK23	515 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FRMD4B	Q9Y2L6	1034 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	USP24	Q9UPU5	2620 aa		11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TNRC6B	Q9UPQ9	1833 aa	Known RBP	11.97	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TAF4	O00268	1085 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PDXK	O00764	312 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	STC2	O76061	302 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SLFN14	P0C7P3	912 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RALA	P11233	206 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CD58	P19256	250 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	CD6	P30203	668 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	VAMP7	P51809	220 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	KIF11	P52732	1056 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	RING1	Q06587	406 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	SLC14A1	Q13336	389 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	HNRNPD	Q14103	355 aa	Known RBP	11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ZNF423	Q2M1K9	1284 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	WDR45B	Q5MNZ6	344 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	C1orf220	Q5T0J3	134 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	KLHDC10	Q6PID8	442 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840		Q6ZNB5	142 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FOXJ1	Q92949	421 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	P2RY11	Q96G91	374 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	TOE1	Q96GM8	510 aa	Known RBP	11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	HEXIM2	Q96MH2	286 aa	Known RBP	11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	DCBLD2	Q96PD2	775 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	GPR174	Q9BXC1	333 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	MIR1-1HG	Q9H1L0	117 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	ITM2C	Q9NQX7	267 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FBXO10	Q9UK96	956 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	PCDHA5	Q9Y5H7	936 aa		11.96	□□□□□ -0.49
PTP4A2-211	ENST00000528840	FAM221B	A6H8Z2	402 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CALU	O43852	315 aa	Predicted RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SYNCRIP	O60506	623 aa	Known RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZSCAN22	P10073	491 aa	Predicted RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CHKA	P35790	457 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GCLM	P48507	274 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PSEN1	P49768	467 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	COG7	P83436	770 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	EFEMP1	Q12805	493 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	STARD3	Q14849	445 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GEN1	Q17RS7	908 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FUT11	Q495W5	492 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZNF394	Q53GI3	561 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RAB44	Q7Z6P3	723 aa	Predicted RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TADA2B	Q86TJ2	420 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TMPRSS6	Q8IU80	811 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DENND1C	Q8IV53	801 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TMEM174	Q8WUU8	243 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DUSP16	Q9BY84	665 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MKRN2	Q9H000	416 aa	Known RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MMRN2	Q9H8L6	949 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CYP3A43	Q9HB55	503 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	APOBEC3G	Q9HC16	384 aa	Known RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	WSB2	Q9NYS7	404 aa	Predicted RBP	11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SUSD2	Q9UGT4	822 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RASAL2	Q9UJF2	1139 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	RCOR1	Q9UKL0	485 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CFAP45	Q9UL16	551 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	LHX6	Q9UPM6	363 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZNF510	Q9Y2H8	683 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MYH10	P35580	1976 aa		11.95	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PLXND1	Q9Y4D7	1925 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FRY	Q5TBA9	3013 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840		A0A1B0GTW7	788 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840		A0A1B0GVL5	298 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MEI4	A8MW99	385 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	KCNJ18	B7U540	433 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ACTN4	O43707	911 aa	Known RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GJB3	O75712	270 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	F13A1	P00488	732 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NCAM1	P13591	858 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	IL12RB1	P42701	662 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	MFAP3	P55082	362 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DNM1	Q05193	864 aa	Known RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PPP3CA	Q08209	521 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	INCA1	Q0VD86	236 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	GRIK2	Q13002	908 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	FYB2	Q5VWT5	728 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CCDC186	Q7Z3E2	898 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	METTL3	Q86U44	580 aa	Known RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	NAXD	Q8IW45	347 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	ZNF276	Q8N554	614 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	CCDC150	Q8NCX0	1101 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	TAS1R2	Q8TE23	839 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SETD7	Q8WTS6	366 aa	Known RBP	11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	UCMA	Q8WVF2	138 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DNASE2B	Q8WZ79	361 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	SIPA1	Q96FS4	1042 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	BACH2	Q9BYV9	841 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	IMPG2	Q9BZV3	1241 aa		11.94	□□□□□ -0.5
PTP4A2-211	ENST00000528840	DNAI2	Q9GZS0	605 aa		11.94	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms