RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 CHKAP35790 457 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 EIF2DP41214 584 aaKnown RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 DGKGP49619 791 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 PGFP49763 221 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 MARSP56192 900 aaKnown RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 MRPS21P82921 87 aaKnown RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 KCNJ12Q14500 433 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 ELF2Q15723 593 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 CNGA2Q16280 664 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 USP39Q53GS9 565 aaKnown RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 FKBP15Q5T1M5 1219 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 BSPRYQ5W0U4 402 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 LAIR1Q6GTX8 287 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 GJB7Q6PEY0 223 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 TRIM65Q6PJ69 517 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 LCLAT1Q6UWP7 414 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 SYT13Q7L8C5 426 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 SCD5Q86SK9 330 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 WDR5BQ86VZ2 330 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 PASD1Q8IV76 773 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 CHPFQ8IZ52 775 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 CAMKK1Q8N5S9 505 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 ALLCQ8N6M5 410 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 KIAA1958Q8N8K9 716 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 C12orf50Q8NA57 414 aaPredicted RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 ZBTB44Q8NCP5 570 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 UCMAQ8WVF2 138 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 HMGB4Q8WW32 186 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 WBP2Q969T9 261 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 ZFRQ96KR1 1074 aaKnown RBP9.5□□□□□ -0.89
CMTM1-210ENST00000528441 SPACA7Q96KW9 195 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 NOX5Q96PH1 765 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 TUBGCP2Q9BSJ2 902 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 UBXN6Q9BZV1 441 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 EPC1Q9H2F5 836 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 CNGB3Q9NQW8 809 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 ABCC13Q9NSE7 274 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 C2orf42Q9NWW7 574 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 APEX2Q9UBZ4 518 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 INVSQ9Y283 1065 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 USP3Q9Y6I4 520 aa9.5□□□□□ -0.89
CMTM1-210ENST00000528441 FANCMQ8IYD8 2048 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 SYNJ2BP-COX16A0A087WUM0 186 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TCRBV21S2A2A0A5A6 115 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 K7ESF4 209 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 RNF225M0QZC1 329 aaPredicted RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 PMM2O15305 246 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 HOXC11O43248 304 aaPredicted RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 SART1O43290 800 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 MSI1O43347 362 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TSPAN3O60637 253 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 STC2O76061 302 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 FBXO21O94952 628 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 MBD3O95983 291 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 MOCS2O96007 188 aaPredicted RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 LTFP02788 710 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 HOXB2P14652 356 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 CDK11BP21127 795 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 ERCC5P28715 1186 aaPredicted RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 KRT9P35527 623 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 ACADSBP45954 432 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 ID4P47928 161 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 DAOAP59103 153 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 PTK2Q05397 1052 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 SPEM2Q0P670 501 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 AASDHQ4L235 1098 aaPredicted RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 VWA3BQ502W6 1294 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 KLHDC10Q6PID8 442 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 HTR3DQ70Z44 454 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 CACNA2D4Q7Z3S7 1137 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 GPR161Q8N6U8 529 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TERB1Q8NA31 727 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 IPO4Q8TEX9 1081 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 USP33Q8TEY7 942 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 GAB3Q8WWW8 586 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TFAP2BQ92481 460 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 RNF34Q969K3 372 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TRIM62Q9BVG3 475 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 LSM14BQ9BX40 385 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 CIPCQ9C0C6 399 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 LMBRD1Q9NUN5 540 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 TAB2Q9NYJ8 693 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 COX16Q9P0S2 106 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 DNAJC12Q9UKB3 198 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 CDV3Q9UKY7 258 aaKnown RBP9.49□□□□□ -0.89
CMTM1-210ENST00000528441 MMP17Q9ULZ9 603 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 NFE2L3Q9Y4A8 694 aa9.49□□□□□ -0.89
CMTM1-210ENST00000528441 RALGAPA1Q6GYQ0 2036 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 FAM170AA1A519 330 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 YJEFN3A6XGL0 299 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 E7ENQ6 273 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 K7EQS6 105 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 HRO43593 1189 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 LILRB5O75023 590 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 RHOBTB1O94844 696 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 PAPSS2O95340 614 aaPredicted RBP9.48□□□□□ -0.89
CMTM1-210ENST00000528441 APOEP02649 317 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 TNFRSF4P43489 277 aa9.48□□□□□ -0.89
CMTM1-210ENST00000528441 SLC11A2P49281 568 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms