RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 C12orf56Q8IXR9 622 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 XXYLT1Q8NBI6 393 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 RNF149Q8NC42 400 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 NEK11Q8NG66 645 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 GOLGA5Q8TBA6 731 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 PIWIL2Q8TC59 973 aaKnown RBP4.46□□□□□ -1.7
CD44-226ENST00000527889 KIAA1524Q8TCG1 905 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 PLEKHO2Q8TD55 490 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 TCP11Q8WWU5 503 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 PSPC1Q8WXF1 523 aaKnown RBP4.46□□□□□ -1.7
CD44-226ENST00000527889 RSPH1Q8WYR4 309 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 POMGNT1Q8WZA1 660 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 KAT2BQ92831 832 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 SLC35C1Q96A29 364 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 TTC17Q96AE7 1141 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 BORCS6Q96GS4 357 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 NLRP4Q96MN2 994 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 NTPCRQ9BSD7 190 aaKnown RBP4.46□□□□□ -1.7
CD44-226ENST00000527889 BOCQ9BWV1 1114 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 CEP41Q9BYV8 373 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 GPR62Q9BZJ7 368 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 TTYH3Q9C0H2 523 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 HAPLN2Q9GZV7 340 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 FAM49AQ9H0Q0 323 aaPredicted RBP4.46□□□□□ -1.7
CD44-226ENST00000527889 AP5M1Q9H0R1 490 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 MS4A5Q9H3V2 200 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 SUDS3Q9H7L9 328 aaPredicted RBP4.46□□□□□ -1.7
CD44-226ENST00000527889 TMEM206Q9H813 350 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 MINDY3Q9H8M7 445 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 SMURF1Q9HCE7 757 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 PTPRHQ9HD43 1115 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 NLRC4Q9NPP4 1024 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 MAN1C1Q9NR34 630 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 CATSPERZQ9NTU4 200 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 AGPAT5Q9NUQ2 364 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 SETD4Q9NVD3 440 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 ANKFY1Q9P2R3 1169 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 FBXL7Q9UJT9 491 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 FAM184BQ9ULE4 1060 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 DAAM1Q9Y4D1 1078 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 SPO11Q9Y5K1 396 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD44-226ENST00000527889 MAST4O15021 2626 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 ANKRD36A6QL64 1941 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 LTBP2Q14767 1821 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 PHLPP2Q6ZVD8 1323 aa4.46□□□□□ -1.7
CD44-226ENST00000527889 TRBV23OR9-2A0A075B6M9 112 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 A0A087WZ62 844 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 KLHL33A6NCF5 533 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 PABPN1LA6NDY0 278 aaKnown RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 H0YCG3 227 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 INO80B-WBP1J3KQ70 363 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 ZNF561-AS1K7EIQ3 104 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 DVL2O14641 736 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 MAGEB2O15479 319 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 B4GALT5O43286 388 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 DUSP11O75319 330 aaKnown RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 GSTM1P09488 218 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 KRT13P13646 458 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 AKR1A1P14550 325 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CASQ1P31415 396 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 LSP1P33241 339 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 GCLMP48507 274 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 FMO5P49326 533 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CPT1AP50416 773 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 VAMP7P51809 220 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 NLRP11P59045 1033 aaKnown RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 DLG4P78352 724 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 ZNF200P98182 395 aaPredicted RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 MYL7Q01449 175 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 TMEM62Q0P6H9 643 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 BFSP1Q12934 665 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 LSAMPQ13449 338 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 MXD4Q14582 209 aaPredicted RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 NOLC1Q14978 699 aaKnown RBP eCLIP4.45□□□□□ -1.7
CD44-226ENST00000527889 PDCD1Q15116 288 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CRY1Q16526 586 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 SNRNP35Q16560 246 aaKnown RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 EXOC3L4Q17RC7 722 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CBWD6Q4V339 395 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 INO80DQ53TQ3 878 aaPredicted RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 CBWD3Q5JTY5 395 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 PRSS36Q5K4E3 855 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CBWD5Q5RIA9 395 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 ZBTB41Q5SVQ8 909 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 C1orf220Q5T0J3 134 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 MARCH8Q5T0T0 291 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 LMBRD2Q68DH5 695 aaPredicted RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 FSTL4Q6MZW2 842 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 DPY19L2P1Q6NXN4 242 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 ERAP2Q6P179 960 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 PDXDC1Q6P996 788 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 GJB7Q6PEY0 223 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 RAD9BQ6WBX8 426 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 TOGARAM2Q6ZUX3 1019 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 CDR2LQ86X02 465 aaPredicted RBP4.45□□□□□ -1.7
CD44-226ENST00000527889 CNGA4Q8IV77 575 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 ZBTB8OSQ8IWT0 167 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 GPD1LQ8N335 351 aa4.45□□□□□ -1.7
CD44-226ENST00000527889 LINC01465Q8N7H1 131 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms