RNA–Protein interactions for RNA: ENST00000527680.1

TRAPPC4-208, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 569 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-208ENST00000527680 RAD23BP54727 409 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 PNOCQ13519 176 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 DCAF17Q5H9S7 520 aaPredicted RBP23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 Q6ZNB5 142 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 ARHGAP18Q8N392 663 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZNF276Q8N554 614 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC4A11Q8NBS3 891 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 FAXDC2Q96IV6 333 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 TSG101Q99816 390 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 DCLK3Q9C098 648 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 CACNA2D2Q9NY47 1150 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 STRIP2Q9ULQ0 834 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 CYP8B1Q9UNU6 501 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 RAD54BQ9Y620 910 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 CEP192Q8TEP8 1941 aa23.5■■□□□ 1.35
TRAPPC4-208ENST00000527680 KLKB1P03952 638 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 ENGP17813 658 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 CORO1AP31146 461 aaKnown RBP23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 SHC2P98077 582 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZNF33AQ06730 810 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 KIAA1211LQ6NV74 962 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 PIGZQ86VD9 579 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 ARID3AQ99856 593 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 UBXN6Q9BZV1 441 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 PILRBQ9UKJ0 227 aa23.49■■□□□ 1.35
TRAPPC4-208ENST00000527680 MAP1BP46821 2468 aaKnown RBP23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 WASH3PC4AMC7 463 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 NDUFS2O75306 463 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 CEACAM1P13688 526 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 NDUFV2P19404 249 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 PRCPP42785 496 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZNF252P-AS1Q0IIN9 211 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 DUOXA1Q1HG43 343 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC23A3Q6PIS1 610 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 DENND1CQ8IV53 801 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 ANKRD52Q8NB46 1076 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 CEP76Q8TAP6 659 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 GTPBP2Q9BX10 602 aaKnown RBP23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 MARCH2Q9P0N8 246 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC6A14Q9UN76 642 aa23.48■■□□□ 1.35
TRAPPC4-208ENST00000527680 CHD8Q9HCK8 2581 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC12A8A0AV02 714 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 GFRA2O00451 464 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 CYBBP04839 570 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 CSRP1P21291 193 aaKnown RBP23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 TKTL1P51854 596 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 YWHAGP61981 247 aaKnown RBP eCLIP23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 GFPT1Q06210 699 aaPredicted RBP23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 FOXC1Q12948 553 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 ARHGAP17Q68EM7 881 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 KIAA1324Q6UXG2 1013 aaKnown RBP23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 DEFB124Q8NES8 71 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 GABRG3Q99928 467 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC32A1Q9H598 525 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 LRRC4Q9HBW1 653 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 PLXND1Q9Y4D7 1925 aa23.47■■□□□ 1.35
TRAPPC4-208ENST00000527680 IGHV1OR15-9A0A0B4J2B8 117 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 CD19P15391 556 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 HOXD12P35452 270 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 MCCD1P59942 119 aaPredicted RBP23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 FKBP3Q00688 224 aaKnown RBP23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 STARD3Q14849 445 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 ZNF658Q5TYW1 1059 aaPredicted RBP23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 RGL4Q8IZJ4 473 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 ASCC3Q8N3C0 2202 aaKnown RBP23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 UCMAQ8WVF2 138 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 SLC6A17Q9H1V8 727 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 HESX1Q9UBX0 185 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 FBXO10Q9UK96 956 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 AGO1Q9UL18 857 aaKnown RBP23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 STON1Q9Y6Q2 735 aa23.46■■□□□ 1.35
TRAPPC4-208ENST00000527680 SMC2O95347 1197 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 ZBED1O96006 694 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 GOLGA7BQ2TAP0 167 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 CBWD6Q4V339 395 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 SGO2Q562F6 1265 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 CBWD3Q5JTY5 395 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 CBWD5Q5RIA9 395 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 ANKRD40Q6AI12 368 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 RABEPKQ7Z6M1 372 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 HDDC3Q8N4P3 179 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 TRIML1Q8N9V2 468 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 DDI1Q8WTU0 396 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 NDRG1Q92597 394 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 MRGPRX1Q96LB2 322 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 IPO9Q96P70 1041 aaKnown RBP23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 GSDMAQ96QA5 445 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 FAM124BQ9H5Z6 455 aaPredicted RBP23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 FSCN3Q9NQT6 498 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 SLC27A6Q9Y2P4 619 aa23.45■■□□□ 1.34
TRAPPC4-208ENST00000527680 ADAMTS9Q9P2N4 1935 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 PENKP01210 267 aaPredicted RBP23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 SERPINF2P08697 491 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 MFAP3P55082 362 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 YWHAEP62258 255 aaKnown RBP23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 PDE4CQ08493 712 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 LRMPQ12912 555 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 CUL2Q13617 745 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 RAB41Q5JT25 222 aa23.44■■□□□ 1.34
TRAPPC4-208ENST00000527680 FYB2Q5VWT5 728 aa23.44■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms