RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 CHAC2Q8WUX2 184 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NUDT8Q8WV74 236 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 KBTBD7Q8WVZ9 684 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 HERVK_113Q902F9 699 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TRIB2Q92519 343 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 DCUN1D1Q96GG9 259 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 HES6Q96HZ4 224 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 REXO5Q96IC2 774 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 WNK4Q96J92 1243 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CNOT6LQ96LI5 555 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 C1orf74Q96LT6 269 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PANX3Q96QZ0 392 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 NACC1Q96RE7 527 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 MYD88Q99836 296 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TRIM51Q9BSJ1 452 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 IER2Q9BTL4 223 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RHOBTB2Q9BYZ6 727 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 WDR12Q9GZL7 423 aaKnown RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 TRPV6Q9H1D0 765 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 C1orf21Q9H246 121 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TP63Q9H3D4 680 aaPredicted RBP6.01□□□□□ -1.45
CD44-225ENST00000527326 BOLA2Q9H3K6 86 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 IFT22Q9H7X7 185 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 DNAJC18Q9H819 358 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PPCSQ9HAB8 311 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 LIN7BQ9HAP6 207 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A7Q9HAW7 530 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A10Q9HAW8 530 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 UGT1A8Q9HAW9 530 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SYTL2Q9HCH5 934 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 BABAM1Q9NWV8 329 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 GRHL1Q9NZI5 618 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TMEM9Q9P0T7 183 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 POU2F3Q9UKI9 436 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 ZBTB21Q9ULJ3 1066 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PCDHA4Q9UN74 947 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 SLC6A14Q9UN76 642 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 PLA2G4CQ9UP65 541 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 RWDD3Q9Y3V2 267 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 CPQQ9Y646 472 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 TMEM2Q9UHN6 1383 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 C1orf167Q5SNV9 1468 aa6.01□□□□□ -1.45
CD44-225ENST00000527326 FLT1P17948 1338 aa6□□□□□ -1.45
CD44-225ENST00000527326 XDHP47989 1333 aa6□□□□□ -1.45
CD44-225ENST00000527326 PCDH11YQ9BZA8 1340 aa6□□□□□ -1.45
CD44-225ENST00000527326 LRRC37A3O60309 1634 aa6□□□□□ -1.45
CD44-225ENST00000527326 A0A087WZG4 1122 aa6□□□□□ -1.45
CD44-225ENST00000527326 A0A1W2PRG0 241 aa6□□□□□ -1.45
CD44-225ENST00000527326 MAGEB16A2A368 324 aa6□□□□□ -1.45
CD44-225ENST00000527326 OR5K3A6NET4 321 aa6□□□□□ -1.45
CD44-225ENST00000527326 TRIM64A6NGJ6 449 aa6□□□□□ -1.45
CD44-225ENST00000527326 TRIM64BA6NI03 449 aa6□□□□□ -1.45
CD44-225ENST00000527326 GOLGA8JA6NMD2 632 aa6□□□□□ -1.45
CD44-225ENST00000527326 OR5K4A6NMS3 321 aa6□□□□□ -1.45
CD44-225ENST00000527326 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 KLRF2D3W0D1 207 aa6□□□□□ -1.45
CD44-225ENST00000527326 H0YJX3 145 aa6□□□□□ -1.45
CD44-225ENST00000527326 INO80B-WBP1J3KQ70 363 aa6□□□□□ -1.45
CD44-225ENST00000527326 PSMD12O00232 456 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 IRS4O14654 1257 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 PLSCR1O15162 318 aa6□□□□□ -1.45
CD44-225ENST00000527326 HOXC11O43248 304 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 ZW10O43264 779 aa6□□□□□ -1.45
CD44-225ENST00000527326 MSI1O43347 362 aaKnown RBP6□□□□□ -1.45
CD44-225ENST00000527326 FOXO3O43524 673 aa6□□□□□ -1.45
CD44-225ENST00000527326 CCNT2O60583 730 aaKnown RBP6□□□□□ -1.45
CD44-225ENST00000527326 DNAJA2O60884 412 aa6□□□□□ -1.45
CD44-225ENST00000527326 IDH1O75874 414 aaKnown RBP6□□□□□ -1.45
CD44-225ENST00000527326 RHOBTB3O94955 611 aa6□□□□□ -1.45
CD44-225ENST00000527326 CRTAMO95727 393 aa6□□□□□ -1.45
CD44-225ENST00000527326 GGPS1O95749 300 aa6□□□□□ -1.45
CD44-225ENST00000527326 PAHP00439 452 aa6□□□□□ -1.45
CD44-225ENST00000527326 GH1P01241 217 aa6□□□□□ -1.45
CD44-225ENST00000527326 IL1BP01584 269 aa6□□□□□ -1.45
CD44-225ENST00000527326 MMP1P03956 469 aa6□□□□□ -1.45
CD44-225ENST00000527326 P4HBP07237 508 aaKnown RBP6□□□□□ -1.45
CD44-225ENST00000527326 C6orf222P0C671 652 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 ZBTB48P10074 688 aaPredicted RBP6□□□□□ -1.45
CD44-225ENST00000527326 KCNA6P17658 529 aa6□□□□□ -1.45
CD44-225ENST00000527326 MPSTP25325 297 aa6□□□□□ -1.45
CD44-225ENST00000527326 PEX2P28328 305 aa6□□□□□ -1.45
CD44-225ENST00000527326 RRM2P31350 389 aa6□□□□□ -1.45
CD44-225ENST00000527326 CHRNA3P32297 505 aa6□□□□□ -1.45
CD44-225ENST00000527326 MAN1A1P33908 653 aa6□□□□□ -1.45
CD44-225ENST00000527326 KRT20P35900 424 aa6□□□□□ -1.45
CD44-225ENST00000527326 PIK3CAP42336 1068 aa6□□□□□ -1.45
CD44-225ENST00000527326 CENPAP49450 140 aa6□□□□□ -1.45
CD44-225ENST00000527326 SLC26A2P50443 739 aa6□□□□□ -1.45
CD44-225ENST00000527326 ETV1P50549 477 aa6□□□□□ -1.45
CD44-225ENST00000527326 METAP2P50579 478 aaKnown RBP eCLIP6□□□□□ -1.45
CD44-225ENST00000527326 TPTEP56180 551 aa6□□□□□ -1.45
CD44-225ENST00000527326 YWHAGP61981 247 aaKnown RBP eCLIP6□□□□□ -1.45
CD44-225ENST00000527326 CAV1Q03135 178 aa6□□□□□ -1.45
CD44-225ENST00000527326 ZBTB16Q05516 673 aa6□□□□□ -1.45
CD44-225ENST00000527326 RUNX1T1Q06455 604 aa6□□□□□ -1.45
CD44-225ENST00000527326 CALCOCO2Q13137 446 aa6□□□□□ -1.45
CD44-225ENST00000527326 STX3Q13277 289 aa6□□□□□ -1.45
CD44-225ENST00000527326 LAPTM5Q13571 262 aa6□□□□□ -1.45
CD44-225ENST00000527326 CCINQ13939 588 aa6□□□□□ -1.45
CD44-225ENST00000527326 SELPLGQ14242 412 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 105.7 ms