RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 FSBPO95073 299 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 ALDH2P05091 517 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 CYP2F1P24903 491 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 CHKAP35790 457 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 PPP2R2AP63151 447 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 TTC19Q6DKK2 380 aaPredicted RBP16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 SLC39A5Q6ZMH5 540 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 BNIPLQ7Z465 357 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 ZC3H18Q86VM9 953 aaKnown RBP16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 SLC7A14Q8TBB6 771 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 CASD1Q96PB1 797 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 ADAM7Q9H2U9 754 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 EPB41L4BQ9H329 900 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 CENPHQ9H3R5 247 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 HEY1Q9Y5J3 304 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 H7C0C1 242 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 SYN3O14994 580 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 RIPK2O43353 540 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 FYNP06241 537 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 ARL4AP40617 200 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 ATP5OP48047 213 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 MORF4L2Q15014 288 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 SKIDA1Q1XH10 827 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 PM20D1Q6GTS8 502 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 SCML4Q8N228 414 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 SCLYQ96I15 445 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 TRIM62Q9BVG3 475 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 COLEC11Q9BWP8 271 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 NRDE2Q9H7Z3 1164 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 C10orf88Q9H8K7 445 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 AAASQ9NRG9 546 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 RCOR3Q9P2K3 495 aaPredicted RBP16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 TSC2P49815 1807 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 BRCA2P51587 3418 aa16.83■□□□□ 0.28
SNRNP35-204ENST00000527158 GMNCA6NCL1 334 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 GRIK1P39086 918 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 GDF10P55107 478 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 CCL23P55773 120 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 PITX1P78337 314 aaPredicted RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 SLC39A12Q504Y0 691 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 UNC45BQ8IWX7 931 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 ZCCHC9Q8N567 271 aaKnown RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 FAM71DQ8N9W8 422 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 KCTD15Q96SI1 283 aaPredicted RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 SLC9A7Q96T83 725 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 MTMR10Q9NXD2 777 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 SLC12A6Q9UHW9 1150 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 F9P00740 461 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 AIF1P55008 147 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 KRT71Q3SY84 523 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 OTUD1Q5VV17 481 aaPredicted RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 ICE2Q659A1 982 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 NPAS4Q8IUM7 802 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 CSPG4P5Q96PW8 444 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 MRPL9Q9BYD2 267 aaKnown RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 ZCWPW1Q9H0M4 648 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 CDC42EP4Q9H3Q1 356 aaKnown RBP16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 PRDM16Q9HAZ2 1276 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 PIGVQ9NUD9 493 aa16.82■□□□□ 0.28
SNRNP35-204ENST00000527158 CFAP69A5D8W1 941 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 CXCL10P02778 98 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 NR2C2P49116 596 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 LIG3P49916 1009 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 FAAP100Q0VG06 881 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 NFE2Q16621 373 aaPredicted RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 EFHC2Q5JST6 749 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 RNASEH2BQ5TBB1 312 aaKnown RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 CENPTQ96BT3 561 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 PGAP3Q96FM1 320 aaPredicted RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 TOX2Q96NM4 488 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 ACTR5Q9H9F9 607 aaPredicted RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 SHOC2Q9UQ13 582 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 USP3Q9Y6I4 520 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 E7EVH7 732 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 OR4Q2P0C623 313 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 RPL22P35268 128 aaKnown RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 CTCFP49711 727 aaPredicted RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 VARS2Q5ST30 1063 aaKnown RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 BSPRYQ5W0U4 402 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 TAX1BP1Q86VP1 789 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 CEP57Q86XR8 500 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 RELL1Q8IUW5 271 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 CNPY4Q8N129 248 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 PPP1R12CQ9BZL4 782 aa16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 DNAJC17Q9NVM6 304 aaKnown RBP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 BCCIPQ9P287 314 aaKnown RBP eCLIP16.81■□□□□ 0.28
SNRNP35-204ENST00000527158 ANKRD65E5RJM6 399 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 H3BRJ5 948 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 TTC4O95801 387 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 SHBGP04278 402 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 GOT1P17174 413 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 HPDP32754 393 aaPredicted RBP16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 GATMP50440 423 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 TLE2Q04725 743 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 ARL13BQ3SXY8 428 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 FAM171A1Q5VUB5 890 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 BHLHA9Q7RTU4 235 aa16.8■□□□□ 0.28
SNRNP35-204ENST00000527158 PPIL6Q8IXY8 311 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms