RNA–Protein interactions for RNA: ENST00000526570.5

FGFR1-227, Transcript of fibroblast growth factor receptor 1, humanhuman

TSL 1 (best)

Gene FGFR1, Length 5,528 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGFR1-227ENST00000526570 VTA1Q9NP79 307 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 TMEM161AQ9NX61 479 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 UVRAGQ9P2Y5 699 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 MEI4A8MW99 385 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 GCLMP48507 274 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 ATP12AP54707 1039 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 CXCL9Q07325 125 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 NCF4Q15080 339 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 OCLNQ16625 522 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 PHC2Q8IXK0 858 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 ACTRT1Q8TDG2 376 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 SNX19Q92543 992 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 ZDHHC15Q96MV8 337 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 FOXP3Q9BZS1 431 aa12.71□□□□□ -0.38
FGFR1-227ENST00000526570 RGS17Q9UGC6 210 aaPredicted RBP12.71□□□□□ -0.38
FGFR1-227ENST00000526570 RPL26L1Q9UNX3 145 aaKnown RBP12.71□□□□□ -0.38
FGFR1-227ENST00000526570 MAGEB16A2A368 324 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 ITGA1P56199 1179 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 ERVK-9P63128 1117 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PARP6Q2NL67 630 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 RRM2BQ7LG56 351 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 NET1Q7Z628 596 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 AMER2Q8N7J2 671 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PGM2Q96G03 612 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 EFCAB10A6NFE3 127 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 ARHGEF33A8MVX0 844 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PEX1O43933 1283 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 SYNCRIPO60506 623 aaKnown RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 SHCBP1Q8NEM2 672 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 SENP7Q9BQF6 1050 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 OSBPL7Q9BZF2 842 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 TAF6LQ9Y6J9 622 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 A0A0U1RQJ8 604 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PSMD11O00231 422 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 SIN3BO75182 1162 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 NR3C2P08235 984 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 FGFR2P21802 821 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 COILP38432 576 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 BTN3A2P78410 334 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 EIF2B5Q13144 721 aaKnown RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 TOP3AQ13472 1001 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 EDRF1Q3B7T1 1238 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 CYP4V2Q6ZWL3 525 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 CREG2Q8IUH2 290 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 HTRA1Q92743 480 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 RNFT2Q96EX2 444 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 CDC42EP4Q9H3Q1 356 aaKnown RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 EBF2Q9HAK2 575 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 PRDM5Q9NQX1 630 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 GALCP54803 685 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 ARL13BQ3SXY8 428 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 C2CD6Q53TS8 623 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 URGCPQ8TCY9 931 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 GTF3C2Q8WUA4 911 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 OTUB1Q96FW1 271 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 MRPL4Q9BYD3 311 aaKnown RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 CRNNQ9UBG3 495 aaPredicted RBP12.7□□□□□ -0.38
FGFR1-227ENST00000526570 V9GYQ6 96 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 C3P01024 1663 aa12.7□□□□□ -0.38
FGFR1-227ENST00000526570 SLC25A27O95847 323 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 PRKCBP05771 671 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 CYP11B2P19099 503 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 GEMIN4P57678 1058 aaKnown RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 SREBF2Q12772 1141 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 TAF5Q15542 800 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 IMPG1Q17R60 797 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 ZNF699Q32M78 642 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 THEM5Q8N1Q8 247 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 MREGQ8N565 214 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 DIS3LQ8TF46 1054 aaKnown RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 FAM111AQ96PZ2 611 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 KIFC1Q9BW19 673 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 SPATA16Q9BXB7 569 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 UBXN6Q9BZV1 441 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 IL25Q9H293 177 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 PCMTD2Q9NV79 361 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 RIPK2O43353 540 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 FARP2O94887 1054 aaPredicted RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 ADSLP30566 484 aaPredicted RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 CAP2P40123 477 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 GP5P40197 560 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 HADHAP40939 763 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 SRP54P61011 504 aaKnown RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 DRAP1Q14919 205 aaPredicted RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 CENPPQ6IPU0 288 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 TTC30AQ86WT1 665 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 TTC29Q8NA56 475 aaPredicted RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 TAMM41Q96BW9 452 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 C18orf8Q96DM3 657 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 MRPL9Q9BYD2 267 aaKnown RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 ETNK2Q9NVF9 386 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 FKBP14Q9NWM8 211 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.69□□□□□ -0.382e-6■■□□□ 12.6
FGFR1-227ENST00000526570 EDARQ9UNE0 448 aa12.69□□□□□ -0.38
FGFR1-227ENST00000526570 FAM32AQ9Y421 112 aaKnown RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 NADKO95544 446 aaPredicted RBP12.69□□□□□ -0.38
FGFR1-227ENST00000526570 C6orf222P0C671 652 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms