RNA–Protein interactions for RNA: ENST00000526468.1

CAPN1-204, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-204ENST00000526468 IPO4Q8TEX9 1081 aaKnown RBP12.37□□□□□ -0.43
CAPN1-204ENST00000526468 ACOX2Q99424 681 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 DUSP9Q99956 384 aaKnown RBP12.37□□□□□ -0.43
CAPN1-204ENST00000526468 CD93Q9NPY3 652 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 CACNA2D2Q9NY47 1150 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 KLK13Q9UKR3 277 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 SLC6A14Q9UN76 642 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 DOCK9Q9BZ29 2069 aa12.37□□□□□ -0.43
CAPN1-204ENST00000526468 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 A0A1W2PQF6 199 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 MEI4A8MW99 385 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 NDUFS2O75306 463 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 TBX18O95935 607 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 NR3C1P04150 777 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 SERPINF2P08697 491 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 DGKGP49619 791 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 PGFP49763 221 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 DLG4P78352 724 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 C10orf120Q5SQS8 335 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 CEP135Q66GS9 1140 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 RGL4Q8IZJ4 473 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 C12orf29Q8N999 325 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 TRIML1Q8N9V2 468 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 KDF1Q8NAX2 398 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-204ENST00000526468 ANKRD7Q92527 254 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 KLF16Q9BXK1 252 aaPredicted RBP12.36□□□□□ -0.43
CAPN1-204ENST00000526468 IMPG2Q9BZV3 1241 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 SLC6A17Q9H1V8 727 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 CAPN10Q9HC96 672 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 CYLDQ9NQC7 956 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 IL37Q9NZH6 218 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 MARK1Q9P0L2 795 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 HCN2Q9UL51 889 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 NEUROG3Q9Y4Z2 214 aa12.36□□□□□ -0.43
CAPN1-204ENST00000526468 KNTC1P50748 2209 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 DMXL2Q8TDJ6 3036 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 A0A1W2PQH9 124 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 ZNF217O75362 1048 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 ASS1P00966 412 aaKnown RBP12.35□□□□□ -0.43
CAPN1-204ENST00000526468 HLA-DRAP01903 254 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
CAPN1-204ENST00000526468 ACO1P21399 889 aaKnown RBP12.35□□□□□ -0.43
CAPN1-204ENST00000526468 ATP5C1P36542 298 aaKnown RBP12.35□□□□□ -0.43
CAPN1-204ENST00000526468 CLDN10P78369 228 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SEMA3BQ13214 749 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 STARD3Q14849 445 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 PLEKHG6Q3KR16 790 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 ZACNQ401N2 412 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 RESP18Q5W5W9 173 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 HTR3DQ70Z44 454 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 PIP4P1Q86T03 277 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 UNC93AQ86WB7 457 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 CACUL1Q86Y37 369 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SLC41A1Q8IVJ1 513 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 TAF4BQ92750 862 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 TWNKQ96RR1 684 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 GABRG3Q99928 467 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 MMRN2Q9H8L6 949 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 CSNK1G1Q9HCP0 422 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 OSER1Q9NX31 292 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 PLK2Q9NYY3 685 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 WDR35Q9P2L0 1181 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SUSD2Q9UGT4 822 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 NAGPAQ9UK23 515 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 NUDT5Q9UKK9 219 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SCML2Q9UQR0 700 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 FRMD4BQ9Y2L6 1034 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SHROOM3Q8TF72 1996 aa12.35□□□□□ -0.43
CAPN1-204ENST00000526468 SMTNL1A8MU46 457 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 PRRT4C9JH25 899 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 ARHGAP33O14559 1287 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 GREM1O60565 184 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 F13A1P00488 732 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 RPN1P04843 607 aaKnown RBP12.34□□□□□ -0.43
CAPN1-204ENST00000526468 SYPP08247 313 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 RARGP13631 454 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 CD58P19256 250 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 SLC20A2Q08357 652 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 SGSM1Q2NKQ1 1148 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 NIF3L1Q9GZT8 377 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 NMUR1Q9HB89 426 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 SERTAD1Q9UHV2 236 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 RASAL2Q9UJF2 1139 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 PCDHA7Q9UN72 937 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 STARD13Q9Y3M8 1113 aa12.34□□□□□ -0.43
CAPN1-204ENST00000526468 FREM2Q5SZK8 3169 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 TDRD6O60522 2096 aaKnown RBP12.33□□□□□ -0.44
CAPN1-204ENST00000526468 A0A1W2PQD8 194 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 SRRM3A6NNA2 597 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-204ENST00000526468 UPK3BL1B0FP48 263 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 UPK3BL2E5RIL1 263 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
CAPN1-204ENST00000526468 KLRC4O43908 158 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 TRIM49P0CI25 452 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 TRIM49CP0CI26 452 aa12.33□□□□□ -0.44
CAPN1-204ENST00000526468 ZSCAN22P10073 491 aaPredicted RBP12.33□□□□□ -0.44
CAPN1-204ENST00000526468 RDXP35241 583 aaKnown RBP12.33□□□□□ -0.44
CAPN1-204ENST00000526468 INCA1Q0VD86 236 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms