RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 ARHGAP8P85298 464 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 PUM1Q14671 1186 aaKnown RBP eCLIP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 TPD52L1Q16890 204 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 PKDCCQ504Y2 493 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 BSPRYQ5W0U4 402 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 ZNF513Q8N8E2 541 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 EDEM1Q92611 657 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 ZSWIM1Q9BR11 485 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 CRACR2AQ9BSW2 395 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 ARRDC1-AS1Q9H2J1 176 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 CLSTN2Q9H4D0 955 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 POLMQ9NP87 494 aaPredicted RBP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 CNGB3Q9NQW8 809 aa19.43■□□□□ 0.7
CAPN1-203ENST00000525013 OLA1Q9NTK5 396 aaKnown RBP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 BCCIPQ9P287 314 aaKnown RBP eCLIP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 DYNC1LI1Q9Y6G9 523 aaKnown RBP19.43■□□□□ 0.7
CAPN1-203ENST00000525013 YJEFN3A6XGL0 299 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 E7ENQ6 273 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 CHRM1P11229 460 aaPredicted RBP19.42■□□□□ 0.7
CAPN1-203ENST00000525013 GBP1P32455 592 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 CHKAP35790 457 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 ZNF132P52740 706 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 ELF2Q15723 593 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 CSRP2Q16527 193 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 PMF1Q6P1K2 205 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 BHLHA9Q7RTU4 235 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 TRMT11Q7Z4G4 463 aaKnown RBP19.42■□□□□ 0.7
CAPN1-203ENST00000525013 FMNL3Q8IVF7 1028 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 MDGA1Q8NFP4 955 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 KCNV2Q8TDN2 545 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 SLC35F5Q8WV83 523 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 LOXL4Q96JB6 756 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 ZC3H10Q96K80 434 aaKnown RBP19.42■□□□□ 0.7
CAPN1-203ENST00000525013 MED15Q96RN5 788 aa19.42■□□□□ 0.7
CAPN1-203ENST00000525013 CDV3Q9UKY7 258 aaKnown RBP19.42■□□□□ 0.7
CAPN1-203ENST00000525013 AGO1Q9UL18 857 aaKnown RBP19.42■□□□□ 0.7
CAPN1-203ENST00000525013 NUP205Q92621 2012 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 ADAM23O75077 832 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 SDHBP21912 280 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 WASP42768 502 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 MTIF2P46199 727 aaKnown RBP19.41■□□□□ 0.7
CAPN1-203ENST00000525013 DGKGP49619 791 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 DAOAP59103 153 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 CCDC6Q16204 474 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 PLK5Q496M5 336 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 PRR23CQ6ZRP0 262 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 TOGARAM2Q6ZUX3 1019 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 ERMP1Q7Z2K6 904 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 DGLUCYQ7Z3D6 616 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 RASSF3Q86WH2 238 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 PGBD3Q8N328 593 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 HMGB4Q8WW32 186 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 PLD4Q96BZ4 506 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 ABCC13Q9NSE7 274 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 DLL3Q9NYJ7 618 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 SFMBT1Q9UHJ3 866 aa19.41■□□□□ 0.7
CAPN1-203ENST00000525013 RHOBTB1O94844 696 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 EPN2O95208 641 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 CYBBP04839 570 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 HARS2P49590 506 aaKnown RBP19.4■□□□□ 0.7
CAPN1-203ENST00000525013 SDE2Q6IQ49 451 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 GBP6Q6ZN66 633 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 NUP62CLQ9H1M0 184 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 DUSP15Q9H1R2 295 aaPredicted RBP19.4■□□□□ 0.7
CAPN1-203ENST00000525013 ST7Q9NRC1 585 aa19.4■□□□□ 0.7
CAPN1-203ENST00000525013 TCRBV21S2A2A0A5A6 115 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 PRRT4C9JH25 899 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 GABBR2O75899 941 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 LETM1O95202 739 aaPredicted RBP19.39■□□□□ 0.69
CAPN1-203ENST00000525013 NTSR1P30989 418 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 USP8P40818 1118 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 MFAP3P55082 362 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 EGFLAMQ63HQ2 1017 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 GJB7Q6PEY0 223 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 TRIM65Q6PJ69 517 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 ENOSF1Q7L5Y1 443 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 IRF2BP1Q8IU81 584 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 CHPFQ8IZ52 775 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 SCML4Q8N228 414 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 IRGQQ8WZA9 623 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 GOLGA1Q92805 767 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 HSFY1Q96LI6 401 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 MIS12Q9H081 205 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 HCN2Q9UL51 889 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 CNTN6Q9UQ52 1028 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 STARD13Q9Y3M8 1113 aa19.39■□□□□ 0.69
CAPN1-203ENST00000525013 HBS1LQ9Y450 684 aaKnown RBP19.39■□□□□ 0.69
CAPN1-203ENST00000525013 LOC105378220A0A1B0GUY1 285 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 CNOT1A5YKK6 2376 aaKnown RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 MSI1O43347 362 aaKnown RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 FOXD2O60548 495 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 FBXO21O94952 628 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 CISD3P0C7P0 127 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 HOXB2P14652 356 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 SLC9A1P19634 815 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 FOXK2Q01167 660 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 SF3A2Q15428 464 aaKnown RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 TRIP4Q15650 581 aaPredicted RBP19.38■□□□□ 0.69
CAPN1-203ENST00000525013 ARHGAP44Q17R89 818 aa19.38■□□□□ 0.69
CAPN1-203ENST00000525013 EXOC3L4Q17RC7 722 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms