RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 SLC39A10Q9ULF5 831 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 LRCH1Q9Y2L9 728 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 ABCA6Q8N139 1617 aa6.93□□□□□ -1.3
CPNE3-206ENST00000523469 AGLP35573 1532 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 REREQ9P2R6 1566 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 ABHD14A-ACY1A0A1B0GW23 586 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 TARM1B6A8C7 271 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 TMPRSS11DO60235 418 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 FGAP02671 866 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 EIF4A1P60842 406 aaKnown RBP6.92□□□□□ -1.3
CPNE3-206ENST00000523469 CYP4F2P78329 520 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 GRM1Q13255 1194 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 FHL3Q13643 280 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 ATP1A4Q13733 1029 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 ARL6IP4Q66PJ3 421 aaKnown RBP6.92□□□□□ -1.3
CPNE3-206ENST00000523469 SPICE1Q8N0Z3 855 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 VPS50Q96JG6 964 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 TTLL2Q9BWV7 592 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 SNX15Q9NRS6 342 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 DAAM1Q9Y4D1 1078 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 COX11Q9Y6N1 276 aa6.92□□□□□ -1.3
CPNE3-206ENST00000523469 CLTCQ00610 1675 aaKnown RBP6.92□□□□□ -1.3
CPNE3-206ENST00000523469 SYNMO15061 1565 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 OR2W5A6NFC9 320 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 WDR47O94967 919 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 PDE8BO95263 885 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 TMEM225BP0DP42 221 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 PECAM1P16284 738 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-206ENST00000523469 FPR3P25089 353 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 HOXA4Q00056 320 aaPredicted RBP6.91□□□□□ -1.3
CPNE3-206ENST00000523469 PSG6Q00889 435 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 NSUN2Q08J23 767 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPNE3-206ENST00000523469 STARD3Q14849 445 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 ACOX1Q15067 660 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 RAB30Q15771 203 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 SUMO4Q6EEV6 95 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 RD3Q7Z3Z2 195 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 SKAP1Q86WV1 359 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 MUL1Q969V5 352 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 REPS1Q96D71 796 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 WDR24Q96S15 920 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 WDR12Q9GZL7 423 aaKnown RBP6.91□□□□□ -1.3
CPNE3-206ENST00000523469 PLCB1Q9NQ66 1216 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 TFCP2L1Q9NZI6 479 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 MGAT4CQ9UBM8 478 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 TAGLN3Q9UI15 199 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 CDC23Q9UJX2 597 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 CA14Q9ULX7 337 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 SPATA31A6Q5VVP1 1343 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 ZNF518AQ6AHZ1 1483 aa6.91□□□□□ -1.3
CPNE3-206ENST00000523469 COL11A2P13942 1736 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-206ENST00000523469 LRRC3CA6NJW4 275 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 IL6STP40189 918 aaPredicted RBP6.9□□□□□ -1.3
CPNE3-206ENST00000523469 DIO1P49895 249 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 MTAPQ13126 283 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 BIRC2Q13490 618 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 ARHGAP15Q53QZ3 475 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 RNASE12Q5GAN4 147 aaKnown RBP6.9□□□□□ -1.3
CPNE3-206ENST00000523469 TMTC4Q5T4D3 741 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 C1orf228Q6PIY5 440 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 TRIM72Q6ZMU5 477 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 TERB1Q8NA31 727 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 GRAMD1AQ96CP6 724 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 C18orf8Q96DM3 657 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 DAZAP1Q96EP5 407 aaKnown RBP6.9□□□□□ -1.3
CPNE3-206ENST00000523469 SNX18Q96RF0 628 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 RPS6KC1Q96S38 1066 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 MACROD1Q9BQ69 325 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 CIPCQ9C0C6 399 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 SH3BP4Q9P0V3 963 aa6.9□□□□□ -1.3
CPNE3-206ENST00000523469 LRRC7Q96NW7 1537 aa6.9□□□□□ -1.31
CPNE3-206ENST00000523469 VWDEQ8N2E2 1590 aa6.9□□□□□ -1.31
CPNE3-206ENST00000523469 NEURL4Q96JN8 1562 aa6.9□□□□□ -1.31
CPNE3-206ENST00000523469 PLEKHD1A6NEE1 506 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 H7C1Q1 480 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 ZSCAN9O15535 394 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-206ENST00000523469 VIPP01282 170 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 ADRA1DP25100 572 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 YY1P25490 414 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 MCM5P33992 734 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 TNFAIP2Q03169 654 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 LMAN2Q12907 356 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 FCRLBQ6BAA4 426 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 TLDC1Q6P9B6 456 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 KIRREL2Q6UWL6 708 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 LPAR3Q9UBY5 353 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 SERGEFQ9UGK8 458 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 MAGED2Q9UNF1 606 aaPredicted RBP6.89□□□□□ -1.31
CPNE3-206ENST00000523469 DTNAQ9Y4J8 743 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 KDM5CP41229 1560 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 STRCP1A6NGW2 1772 aa6.89□□□□□ -1.31
CPNE3-206ENST00000523469 DNMT1P26358 1616 aaKnown RBP6.88□□□□□ -1.31
CPNE3-206ENST00000523469 A0A087WV62 115 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 GOLGA6L3A6NEY3 463 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 FFAR2O15552 330 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 EXOC3O60645 756 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 CBFA2T3O75081 653 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 DGKQP52824 942 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 NHLH1Q02575 133 aa6.88□□□□□ -1.31
CPNE3-206ENST00000523469 TMEM63BQ5T3F8 832 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms