RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 SLC14A1Q13336 389 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 SV2AQ7L0J3 742 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 PROSER1Q86XN7 944 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 SETD7Q8WTS6 366 aaKnown RBP27.29■■□□□ 1.96
PVT1-219ENST00000523427 CYFIP2Q96F07 1278 aa27.29■■□□□ 1.96
PVT1-219ENST00000523427 MTPAPQ9NVV4 582 aaKnown RBP eCLIP27.29■■□□□ 1.96
PVT1-219ENST00000523427 FAM221BA6H8Z2 402 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 HHLA1C9JL84 531 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 GFRA2O00451 464 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 GJB3O75712 270 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 YEATS4O95619 227 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 RPN1P04843 607 aaKnown RBP27.28■■□□□ 1.96
PVT1-219ENST00000523427 NCAM1P13591 858 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 TRIM21P19474 475 aaKnown RBP27.28■■□□□ 1.96
PVT1-219ENST00000523427 ASPAP45381 313 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 STK4Q13043 487 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 ACAP1Q15027 740 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 ZACNQ401N2 412 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 CEP135Q66GS9 1140 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 HNRNPABQ99729 332 aaKnown RBP27.28■■□□□ 1.96
PVT1-219ENST00000523427 FAM13BQ9NYF5 915 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 RASAL2Q9UJF2 1139 aa27.28■■□□□ 1.96
PVT1-219ENST00000523427 STC2O76061 302 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 HLA-DRAP01903 254 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 CD58P19256 250 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 IL12RB1P42701 662 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 ME1P48163 572 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 GEN1Q17RS7 908 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 Q6ZNB5 142 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 MKRN2Q9H000 416 aaKnown RBP27.27■■□□□ 1.96
PVT1-219ENST00000523427 IL21RQ9HBE5 538 aa27.27■■□□□ 1.96
PVT1-219ENST00000523427 WSB2Q9NYS7 404 aaPredicted RBP27.27■■□□□ 1.96
PVT1-219ENST00000523427 A0A1B0GTW7 788 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 ASS1P00966 412 aaKnown RBP27.26■■□□□ 1.95
PVT1-219ENST00000523427 KLKB1P03952 638 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 NR3C1P04150 777 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 SCD5Q86SK9 330 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 CEP57L1Q8IYX8 460 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 KIAA0895Q8NCT3 520 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 ADAMTS14Q8WXS8 1223 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 EXOC1Q9NV70 894 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 DMAC2Q9NW81 257 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 SERTAD1Q9UHV2 236 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 PCDHA5Q9Y5H7 936 aa27.26■■□□□ 1.95
PVT1-219ENST00000523427 KCNJ18B7U540 433 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 SYNCRIPO60506 623 aaKnown RBP27.25■■□□□ 1.95
PVT1-219ENST00000523427 MFAP3P55082 362 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 EFEMP1Q12805 493 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 TMPRSS6Q8IU80 811 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 TAF4BQ92750 862 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 NT5C1AQ9BXI3 368 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 MMRN2Q9H8L6 949 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 ITM2CQ9NQX7 267 aa27.25■■□□□ 1.95
PVT1-219ENST00000523427 APOBEC2Q9Y235 224 aaKnown RBP27.25■■□□□ 1.95
PVT1-219ENST00000523427 RALAP11233 206 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 KIF11P52732 1056 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 DCAF12L1Q5VU92 463 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 KLHDC10Q6PID8 442 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 SLCO6A1Q86UG4 719 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 FAM124AQ86V42 546 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 UCMAQ8WVF2 138 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 SIPA1Q96FS4 1042 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 ZDHHC5Q9C0B5 715 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 GAREM1Q9H706 876 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 THAP10Q9P2Z0 257 aaPredicted RBP27.24■■□□□ 1.95
PVT1-219ENST00000523427 FBXO10Q9UK96 956 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 PCDHA7Q9UN72 937 aa27.24■■□□□ 1.95
PVT1-219ENST00000523427 KLRC4O43908 158 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 CAPNS1P04632 268 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 CORO1AP31146 461 aaKnown RBP27.23■■□□□ 1.95
PVT1-219ENST00000523427 TPMTP51580 245 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 KMT5BQ4FZB7 885 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 ZNF394Q53GI3 561 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 FYB2Q5VWT5 728 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 TADA2BQ86TJ2 420 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 SLC9A9Q8IVB4 645 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 TMC2Q8TDI7 906 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 SORCS1Q8WY21 1168 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 DNASE2BQ8WZ79 361 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 PRCCQ92733 491 aaPredicted RBP27.23■■□□□ 1.95
PVT1-219ENST00000523427 IMPG2Q9BZV3 1241 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 CIPCQ9C0C6 399 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 CCDC86Q9H6F5 360 aaKnown RBP27.23■■□□□ 1.95
PVT1-219ENST00000523427 USP36Q9P275 1121 aaKnown RBP27.23■■□□□ 1.95
PVT1-219ENST00000523427 NBEAQ8NFP9 2946 aa27.23■■□□□ 1.95
PVT1-219ENST00000523427 GOLGA8CPA6NN73 597 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 K7ELQ4 463 aaPredicted RBP27.22■■□□□ 1.95
PVT1-219ENST00000523427 ACADMP11310 421 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 C1orf220Q5T0J3 134 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 DENND1CQ8IV53 801 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 MDM1Q8TC05 714 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 SNX19Q92543 992 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 KCTD10Q9H3F6 313 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 APOBEC3GQ9HC16 384 aaKnown RBP27.22■■□□□ 1.95
PVT1-219ENST00000523427 EIF2B4Q9UI10 523 aaKnown RBP27.22■■□□□ 1.95
PVT1-219ENST00000523427 PCOLCE2Q9UKZ9 415 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 CLEC4EQ9ULY5 219 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 FRMD4BQ9Y2L6 1034 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 SLC27A6Q9Y2P4 619 aa27.22■■□□□ 1.95
PVT1-219ENST00000523427 BCAT2O15382 392 aaPredicted RBP27.21■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms