RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 ZNF500O60304 480 aaPredicted RBP5.68□□□□□ -1.5
SKP1-211ENST00000523359 TAF5LO75529 589 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 HSP90AA1P07900 732 aaKnown RBP5.68□□□□□ -1.5
SKP1-211ENST00000523359 ITGA2BP08514 1039 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 FPR3P25089 353 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 COPB2P35606 906 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 FOXO1Q12778 655 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 PRR16Q569H4 304 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 TSTD2Q5T7W7 516 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 RINT1Q6NUQ1 792 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 KLHL17Q6TDP4 642 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 PTCHD4Q6ZW05 846 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 TTC30AQ86WT1 665 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 RASAL3Q86YV0 1011 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 ABHD11Q8NFV4 315 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 STT3BQ8TCJ2 826 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 TRAPPC12Q8WVT3 735 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 VPS50Q96JG6 964 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 PAGR1Q9BTK6 254 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 TP63Q9H3D4 680 aaPredicted RBP5.68□□□□□ -1.5
SKP1-211ENST00000523359 MGAT4CQ9UBM8 478 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 ANAPC4Q9UJX5 808 aa5.68□□□□□ -1.5
SKP1-211ENST00000523359 GCOM1H8Y6P7 765 aaPredicted RBP5.67□□□□□ -1.5
SKP1-211ENST00000523359 CA12O43570 354 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 DRD4P21917 467 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 DIO1P49895 249 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 BFSP2Q13515 415 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 CSHL1Q14406 222 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 POSTNQ15063 836 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 TIGD6Q17RP2 521 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 BTBD16Q32M84 506 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 TBC1D25Q3MII6 688 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 FAM153CQ494X1 144 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 AASDHQ4L235 1098 aaPredicted RBP5.67□□□□□ -1.5
SKP1-211ENST00000523359 AARS2Q5JTZ9 985 aaKnown RBP5.67□□□□□ -1.5
SKP1-211ENST00000523359 JMJD6Q6NYC1 403 aaPredicted RBP5.67□□□□□ -1.5
SKP1-211ENST00000523359 MSANTD2Q6P1R3 559 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 NAPRTQ6XQN6 538 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 LDHAL6AQ6ZMR3 332 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 RINLQ6ZS11 566 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 NRSN1Q8IZ57 195 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 TMEM120AQ9BXJ8 343 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 MLXIPQ9HAP2 919 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 IL17RBQ9NRM6 502 aa5.67□□□□□ -1.5
SKP1-211ENST00000523359 HERC5Q9UII4 1024 aaKnown RBP5.67□□□□□ -1.5
SKP1-211ENST00000523359 IPO5O00410 1097 aaKnown RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 ACTL6BO94805 426 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 ADRA1DP25100 572 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 GSTM5P46439 218 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 DGKQP52824 942 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 LMAN2Q12907 356 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 PRKG1Q13976 671 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 KCNJ12Q14500 433 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 RNASE12Q5GAN4 147 aaKnown RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 TANGO2Q6ICL3 276 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 CCDC144NLQ6NUI1 221 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 OLFML1Q6UWY5 402 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 PIK3AP1Q6ZUJ8 805 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 GRASPQ7Z6J2 395 aaPredicted RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 CCDC117Q8IWD4 279 aaPredicted RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 MYRIPQ8NFW9 859 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 SCAMP5Q8TAC9 235 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 CAGE1Q8TC20 777 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 PRR11Q96HE9 360 aaPredicted RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 SCLT1Q96NL6 688 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 EIF3CQ99613 913 aaKnown RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 NAP1L4Q99733 375 aaKnown RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 MACROD1Q9BQ69 325 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 RTKNQ9BST9 563 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 THAP7Q9BT49 309 aaPredicted RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 SAP30LQ9HAJ7 183 aa5.66□□□□□ -1.5
SKP1-211ENST00000523359 ALG13Q9NP73 1137 aaKnown RBP5.66□□□□□ -1.5
SKP1-211ENST00000523359 EPB41L2O43491 1005 aaKnown RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 TMPRSS11DO60235 418 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 RPP40O75818 363 aaKnown RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 CER1O95813 267 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 MYCLP12524 364 aaPredicted RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 PNLIPRP1P54315 467 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 AP2B1P63010 937 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 CYP4F2P78329 520 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 POU5F1Q01860 360 aaKnown RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 ERCC6LQ2NKX8 1250 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 TMEM95Q3KNT9 176 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 FAM90A2PQ658T7 463 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 DENND2CQ68D51 928 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 MTHFD1LQ6UB35 978 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 KIRREL2Q6UWL6 708 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 CLASRPQ8N2M8 674 aaKnown RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 GALNT15Q8N3T1 639 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.65□□□□□ -1.5
SKP1-211ENST00000523359 SIMC1Q8NDZ2 872 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 NGDNQ8NEJ9 315 aaKnown RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 OTUD7AQ8TE49 926 aaPredicted RBP5.65□□□□□ -1.5
SKP1-211ENST00000523359 SLC22A17Q8WUG5 538 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 WDR60Q8WVS4 1066 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 PPM1EQ8WY54 764 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 VOPP1Q96AW1 172 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 TBC1D20Q96BZ9 403 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.5
SKP1-211ENST00000523359 PABPC3Q9H361 631 aaKnown RBP5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms