RNA–Protein interactions for RNA: ENST00000522774.1

RAB11FIP1-204, Transcript of RAB11 family interacting protein 1, humanhuman

TSL 1 (best)

Gene RAB11FIP1, Length 3,078 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1-204ENST00000522774 PARK7Q99497 189 aaKnown RBP11.15□□□□□ -0.62
RAB11FIP1-204ENST00000522774 GDAP2Q9NXN4 497 aa11.15□□□□□ -0.62
RAB11FIP1-204ENST00000522774 DTLQ9NZJ0 730 aa11.15□□□□□ -0.62
RAB11FIP1-204ENST00000522774 NUMBLQ9Y6R0 609 aa11.15□□□□□ -0.62
RAB11FIP1-204ENST00000522774 ZNF638Q14966 1978 aaKnown RBP11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 DCAF8L1A6NGE4 600 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ZNF487B1APH4 448 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CLDN5O00501 218 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ALADP13716 330 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ETV4P43268 484 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SLC18A2Q05940 514 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CBLBQ13191 982 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 E2F5Q15329 346 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CDHR3Q6ZTQ4 885 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 APPL2Q8NEU8 664 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 RFWD2Q8NHY2 731 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 APOPT1Q96IL0 206 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 LRRC37BQ96QE4 947 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 KANSL3Q9P2N6 904 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CACNG4Q9UBN1 327 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CPA4Q9UI42 421 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 STK38LQ9Y2H1 464 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 USP3Q9Y6I4 520 aa11.15□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MYO18AQ92614 2054 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TRIM49D1C9J1S8 452 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 GCATO75600 419 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 BEST1O76090 585 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CD4P01730 458 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 DHRS4L1P0CG22 281 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 VAV1P15498 845 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ACAT1P24752 427 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TARSP26639 723 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 PSEN2P49810 448 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TAF6P49848 677 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CDC42EP1Q00587 391 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 BEX3Q00994 111 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SETDB1Q15047 1291 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 OTUD1Q5VV17 481 aaPredicted RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TRMT10BQ6PF06 316 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 UNC5AQ6ZN44 842 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 LIMS2Q7Z4I7 341 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SLC26A11Q86WA9 606 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 LRRC6Q86X45 466 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CEP57Q86XR8 500 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ADGRF2Q8IZF7 708 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 DEFB106AQ8N104 65 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 VPS52Q8N1B4 723 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ZNF560Q96MR9 790 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 QKIQ96PU8 341 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TMEM237Q96Q45 408 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 VPS11Q9H270 941 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MANSC1Q9H8J5 431 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SCN4AP35499 1836 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CSH1P0DML2 217 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CSH2P0DML3 217 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 KCNE1P15382 129 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 IBSPP21815 317 aaPredicted RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MAGEA3P43357 314 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ADIGQ0VDE8 80 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 BMPR2Q13873 1038 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 XKR4Q5GH76 650 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 PIGZQ86VD9 579 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SMG8Q8ND04 991 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MCUQ8NE86 351 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 UTP4Q969X6 686 aaKnown RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TTC17Q96AE7 1141 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 FAM149B1Q96BN6 582 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 TBC1D31Q96DN5 1066 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SIGLEC10Q96LC7 697 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 NCAPGQ9BPX3 1015 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 FRMD8Q9BZ67 464 aaPredicted RBP11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 DCTN4Q9UJW0 460 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 IPPQ9Y573 584 aa11.14□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SYNJ2BP-COX16A0A087WUM0 186 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ZNF865P0CJ78 1059 aaPredicted RBP11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 PRKCHP24723 683 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 AXLP30530 894 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SCNN1AP37088 669 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SKIV2L2P42285 1042 aaKnown RBP11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 NDUFV1P49821 464 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 RABGGTBP53611 331 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 LILRA4P59901 499 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 RIPK1Q13546 671 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 CCL14Q16627 93 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 SPRYD7Q5W111 196 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 ARCQ7LC44 396 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 NLRP9Q7RTR0 991 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 B3GALNT2Q8NCR0 500 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 HSFY1Q96LI6 401 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 LGMNQ99538 433 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 COX16Q9P0S2 106 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 GTF2IRD1Q9UHL9 959 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 HAO1Q9UJM8 370 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MAD1L1Q9Y6D9 718 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 UNCXA6NJT0 531 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 APOEP02649 317 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 MYL3P08590 195 aa11.13□□□□□ -0.63
RAB11FIP1-204ENST00000522774 T-ENOLP0DO92 83 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms