RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 HS6ST3Q8IZP7 471 aa16.67■□□□□ 0.26
USP42-207ENST00000521713 CIPCQ9C0C6 399 aa16.67■□□□□ 0.26
USP42-207ENST00000521713 BTBD19C9JJ37 291 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 ZNF135P52742 658 aaPredicted RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 ADIGQ0VDE8 80 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 PPM1LQ5SGD2 360 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 C11orf63Q6NUN7 778 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 SPOCD1Q6ZMY3 1216 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 EFL1Q7Z2Z2 1120 aaKnown RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 DUSP9Q99956 384 aaKnown RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 CD274Q9NZQ7 290 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 LRCH1Q9Y2L9 728 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 USP2O75604 605 aaPredicted RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 WDR47O94967 919 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 MYL2P10916 166 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 ZNF280AP59817 542 aaPredicted RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 SKOR1P84550 965 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 LZTR1Q8N653 840 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 ZNF557Q8N988 423 aaPredicted RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 KCND1Q9NSA2 647 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 ARHGAP20Q9P2F6 1191 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 ANKRD63C9JTQ0 380 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 SYNCRIPO60506 623 aaKnown RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 TGM2P21980 687 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 COPAP53621 1224 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 OTUD4Q01804 1114 aaKnown RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 CREMQ03060 361 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 TTC39BQ5VTQ0 682 aaPredicted RBP16.66■□□□□ 0.26
USP42-207ENST00000521713 LVRNQ6Q4G3 990 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 SH3RF1Q7Z6J0 888 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 IL31RAQ8NI17 732 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 SLC2A14Q8TDB8 520 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 FAM210AQ96ND0 272 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 DCLK3Q9C098 648 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 RXFP1Q9HBX9 757 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 GPATCH2LQ9NWQ4 482 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 C15orf41Q9Y2V0 281 aa16.66■□□□□ 0.26
USP42-207ENST00000521713 SNHG28P0DPA3 235 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ZNF284Q2VY69 593 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 GPR141Q7Z602 305 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 C4orf33Q8N1A6 199 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 PPTC7Q8NI37 304 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 CASKIN2Q8WXE0 1202 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 CASP10Q92851 521 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ATXN3LQ9H3M9 355 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SCUBE2Q9NQ36 999 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 DRG1Q9Y295 367 aaKnown RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 RPS6KL1Q9Y6S9 549 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 BAZ2BQ9UIF8 2168 aaKnown RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 SRP72O76094 671 aaKnown RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 LYPLA2O95372 231 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 CALB2P22676 271 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SCNN1GP51170 649 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 RENBPP51606 427 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SPRYD7Q5W111 196 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 PACS2Q86VP3 889 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 KIAA0319LQ8IZA0 1049 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ADGRE3Q9BY15 652 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 BRD8Q9H0E9 1235 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 GGA2Q9UJY4 613 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ROBO3Q96MS0 1386 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SDR42E2A6NKP2 422 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 PTENP60484 403 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ERMARDQ5T6L9 678 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 CCDC149Q6ZUS6 474 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 TMEM161BQ8NDZ6 487 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 TSPAN18Q96SJ8 248 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 HSD17B14Q9BPX1 270 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 PCMTD2Q9NV79 361 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SMARCAL1Q9NZC9 954 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 MSRAQ9UJ68 235 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 COL14A1Q05707 1796 aaKnown RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 SEC24DO94855 1032 aaPredicted RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 SLURP2P0DP57 97 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 ACAP1Q15027 740 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 FAM83EQ2M2I3 478 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 HOMEZQ8IX15 550 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 SYNDIG1Q9H7V2 258 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 LRRC40Q9H9A6 602 aa16.65■□□□□ 0.26
USP42-207ENST00000521713 MRPL17Q9NRX2 175 aaKnown RBP16.65■□□□□ 0.26
USP42-207ENST00000521713 A0A087X0B3 334 aa16.64■□□□□ 0.26
USP42-207ENST00000521713 MICAL2O94851 1124 aa16.64■□□□□ 0.26
USP42-207ENST00000521713 JCHAINP01591 159 aa16.64■□□□□ 0.26
USP42-207ENST00000521713 PRPF39Q86UA1 669 aaKnown RBP16.64■□□□□ 0.26
USP42-207ENST00000521713 E2F7Q96AV8 911 aa16.64■□□□□ 0.26
USP42-207ENST00000521713 PDGFDQ9GZP0 370 aaPredicted RBP16.64■□□□□ 0.26
USP42-207ENST00000521713 PDGFCQ9NRA1 345 aa16.64■□□□□ 0.26
USP42-207ENST00000521713 SF3B1O75533 1304 aaKnown RBP eCLIP16.64■□□□□ 0.263e-6■■■■■ 85.1
USP42-207ENST00000521713 CRTAMO95727 393 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 ITGALP20701 1170 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 RUNX1T1Q06455 604 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 STARD3Q14849 445 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 CCNG2Q16589 344 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 LRRC6Q86X45 466 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 PGLYRP2Q96PD5 576 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 AVENQ9NQS1 362 aaPredicted RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 TRMT6Q9UJA5 497 aaKnown RBP16.64■□□□□ 0.25
USP42-207ENST00000521713 PHTF1Q9UMS5 762 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 COL1A2P08123 1366 aa16.64■□□□□ 0.25
USP42-207ENST00000521713 FAM237AA0A1B0GTK4 181 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms