RNA–Protein interactions for RNA: ENST00000521621.5

CLK4-209, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 2,780 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-209ENST00000521621 ARSAP15289 507 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 OPRD1P41143 372 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 POLR2FP61218 127 aaKnown RBP9.89□□□□□ -0.83
CLK4-209ENST00000521621 YWHAZP63104 245 aaKnown RBP9.89□□□□□ -0.83
CLK4-209ENST00000521621 NOMO3P69849 1222 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 SLC6A3Q01959 620 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 GRSF1Q12849 480 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLK4-209ENST00000521621 IER5LQ5T953 404 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 FSTL4Q6MZW2 842 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 OLFML1Q6UWY5 402 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 NOP9Q86U38 636 aaKnown RBP9.89□□□□□ -0.83
CLK4-209ENST00000521621 PHF13Q86YI8 300 aaPredicted RBP9.89□□□□□ -0.83
CLK4-209ENST00000521621 CREBRFQ8IUR6 639 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 PRSS33Q8NF86 280 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 RNF139Q8WU17 664 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 VCPIP1Q96JH7 1222 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 P2RY13Q9BPV8 354 aa9.89□□□□□ -0.83
CLK4-209ENST00000521621 DDX50Q9BQ39 737 aaKnown RBP9.89□□□□□ -0.83
CLK4-209ENST00000521621 GFPT2O94808 682 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 ENDOD1O94919 500 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 ERBB2P04626 1255 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 SLC2A3P11169 496 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 ADH5P11766 374 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 CHRNB2P17787 502 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 COL9A1P20849 921 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 CCR3P51677 355 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 MRPS21P82921 87 aaKnown RBP9.88□□□□□ -0.83
CLK4-209ENST00000521621 CENPCQ03188 943 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 PPP2R5DQ14738 602 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 NFKBIBQ15653 356 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 KIAA0907Q7Z7F0 614 aaPredicted RBP9.88□□□□□ -0.83
CLK4-209ENST00000521621 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.88□□□□□ -0.83
CLK4-209ENST00000521621 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
CLK4-209ENST00000521621 GTSE1Q9NYZ3 720 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 WNT6Q9Y6F9 365 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 ZNF318Q5VUA4 2279 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 OTOL1A6NHN0 477 aaPredicted RBP9.88□□□□□ -0.83
CLK4-209ENST00000521621 E5RJQ4 531 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 EPHB6O15197 1021 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 PI15O43692 258 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 NBL1P41271 181 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 FANCCQ00597 558 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 FMO1Q01740 532 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 TCF15Q12870 199 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 RAPGEF1Q13905 1077 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 C5orf22Q49AR2 442 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 IRF2BP2Q7Z5L9 587 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 CPXM1Q96SM3 734 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 NACA2Q9H009 215 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 TSPY26PQ9H489 355 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 EBF3Q9H4W6 596 aa9.88□□□□□ -0.83
CLK4-209ENST00000521621 BZW2Q9Y6E2 419 aaKnown RBP9.88□□□□□ -0.83
CLK4-209ENST00000521621 MUC22E2RYF6 1773 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 CXorf51AA0A1B0GTR3 108 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 LILRB5O75023 590 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 LCP1P13796 627 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 MMP8P22894 467 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 HNRNPH3P31942 346 aaKnown RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 NOS2P35228 1153 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 GRIA2P42262 883 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 VASPP50552 380 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 SARM1Q6SZW1 724 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 C1orf210Q8IVY1 113 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 BBS7Q8IWZ6 715 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 FLCNQ8NFG4 579 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 OLIG1Q8TAK6 271 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 SPAG5Q96R06 1193 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 PNKPQ96T60 521 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 LINC00597Q9H2U6 94 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 FAM207AQ9NSI2 230 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 GOLGA6L19H0YKK7 550 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 CBFA2T2O43439 604 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 GBP1P32455 592 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 KLK7P49862 253 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 GALK1P51570 392 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 NRLP54845 237 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 C1QBPQ07021 282 aaKnown RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 TNK2Q07912 1038 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 IFRD2Q12894 506 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 PTP4A2Q12974 167 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 TRIM14Q14142 442 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 PTPN20Q4JDL3 420 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 HSP90AA4PQ58FG1 418 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 TTC39BQ5VTQ0 682 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 NUDT18Q6ZVK8 323 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 MAML2Q8IZL2 1156 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 CAMKK1Q8N5S9 505 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 DQX1Q8TE96 717 aaKnown RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 ZFYVE19Q96K21 471 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 FCRL2Q96LA5 508 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 NAP1L5Q96NT1 182 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 XPO6Q96QU8 1125 aaKnown RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 LMAN1LQ9HAT1 526 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 RASAL2Q9UJF2 1139 aa9.87□□□□□ -0.83
CLK4-209ENST00000521621 AGO1Q9UL18 857 aaKnown RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 MTF2Q9Y483 593 aaPredicted RBP9.87□□□□□ -0.83
CLK4-209ENST00000521621 KCNU1A8MYU2 1149 aa9.86□□□□□ -0.83
CLK4-209ENST00000521621 TEX33O43247 280 aa9.86□□□□□ -0.83
CLK4-209ENST00000521621 TBX18O95935 607 aa9.86□□□□□ -0.83
CLK4-209ENST00000521621 ABL1P00519 1130 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms