RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 KCNJ12Q14500 433 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 PDCD2Q16342 344 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 PFKFB4Q16877 469 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 AASDHQ4L235 1098 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 C10orf62Q5T681 223 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 NAPRTQ6XQN6 538 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 ARHGEF25Q86VW2 580 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 NRSN1Q8IZ57 195 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 CLASRPQ8N2M8 674 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 BOLLQ8N9W6 283 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 IPO4Q8TEX9 1081 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 WDR60Q8WVS4 1066 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 RSC1A1Q92681 617 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 EID2BQ96D98 161 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 PRPF18Q99633 342 aaKnown RBP3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 ARPC5LQ9BPX5 153 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 CIPCQ9C0C6 399 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 OBP2BQ9NPH6 170 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 ADAM21Q9UKJ8 722 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 NFU1Q9UMS0 254 aa3.82□□□□□ -1.8
HMGB1P41-201ENST00000520234 KIF21BO75037 1637 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 PNMA6EA0A0J9YXQ4 647 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 hCG_1642624A0A1W2PR95 340 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 BTBD19C9JJ37 291 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 SYT5O00445 386 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 PIP5K1BO14986 540 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 DHHO43323 396 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 C1QL1O75973 258 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 CSTBP04080 98 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 ITGA5P08648 1049 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FPR3P25089 353 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 PDIA3P30101 505 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 PBX1P40424 430 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 GSTM5P46439 218 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 NHLH1Q02575 133 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 CFHR3Q02985 330 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 SEMA3BQ13214 749 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 RNASE12Q5GAN4 147 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 TMEM196Q5HYL7 178 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM83BQ5T0W9 1011 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM90A2PQ658T7 463 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FCRLBQ6BAA4 426 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FBXO42Q6P3S6 717 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 GGT6Q6P531 493 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 KIRREL2Q6UWL6 708 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 BCDIN3DQ7Z5W3 292 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 AMIGO2Q86SJ2 522 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 ADGRG3Q86Y34 549 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 P3H2Q8IVL5 708 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 LINC01465Q8N7H1 131 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 C12orf76Q8N812 135 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FAM71DQ8N9W8 422 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 ADAMTS18Q8TE60 1221 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 REPS1Q96D71 796 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 EDC3Q96F86 508 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 LTV1Q96GA3 475 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 FYTTD1Q96QD9 318 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 RMDN3Q96TC7 470 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 EIF3CQ99613 913 aaKnown RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 TP63Q9H3D4 680 aaPredicted RBP3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 SH3BP4Q9P0V3 963 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 COX11Q9Y6N1 276 aa3.81□□□□□ -1.8
HMGB1P41-201ENST00000520234 SPATA31A1Q5TZJ5 1347 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 LGALS16A8MUM7 142 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 POC1B-GALNT4F8VUJ3 575 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 UBE2Q2LH0YL09 131 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 J3KTA2 159 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 IFRD1O00458 451 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PCDH17O14917 1159 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 EXOC3O60645 756 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PDE8BO95263 885 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 MT-CO3P00414 261 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 ANXA6P08133 673 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 CHRM5P08912 532 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 TMIGD3P0DMS9 266 aaPredicted RBP3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 DRD1P21728 446 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 YY1P25490 414 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 SERPINF1P36955 418 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 COPB1P53618 953 aaKnown RBP3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 DEUP1Q05D60 604 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 CCDC15Q0P6D6 951 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 FOXO1Q12778 655 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 ELF2Q15723 593 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 GRAMD1BQ3KR37 738 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 CCDC38Q502W7 563 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 GRHL2Q6ISB3 625 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 CCDC144NLQ6NUI1 221 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PTF1AQ7RTS3 328 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 RD3Q7Z3Z2 195 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 GALNT4Q8N4A0 578 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 CCDC17Q96LX7 622 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 MMS19Q96T76 1030 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PAAF1Q9BRP4 392 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PRDM13Q9H4Q3 707 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 LPAR3Q9UBY5 353 aa3.8□□□□□ -1.8
HMGB1P41-201ENST00000520234 PRXQ9BXM0 1461 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 CLIP1P30622 1438 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 VPS8Q8N3P4 1428 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 GXYLT2A0PJZ3 443 aa3.79□□□□□ -1.8
HMGB1P41-201ENST00000520234 AQP12BA6NM10 295 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 649.2 ms