RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ACSL3O95573 720 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 TUBB8Q3ZCM7 444 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 KDM7AQ6ZMT4 941 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 ARFGAP2Q8N6H7 521 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 NTAN1Q96AB6 310 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 PIGVQ9NUD9 493 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 BCLAF3A2AJT9 711 aaKnown RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 H3BRJ5 948 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 SKOR1P84550 965 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 XRCC4Q13426 336 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 KYNUQ16719 465 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 EMC10Q5UCC4 262 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 UHMK1Q8TAS1 419 aaKnown RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 PRCCQ92733 491 aaPredicted RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 CASD1Q96PB1 797 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 ZCWPW1Q9H0M4 648 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 NINJ2Q9NZG7 142 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 USP3Q9Y6I4 520 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 GOT1P17174 413 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 GRIK1P39086 918 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 MAGEA4P43358 317 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 DNAJC21Q5F1R6 531 aaKnown RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 BZW1Q7L1Q6 419 aaKnown RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 BHLHA9Q7RTU4 235 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 CDKL3Q8IVW4 592 aaPredicted RBP27.97■■■□□ 2.07
COL13A1-212ENST00000520133 PYROXD2Q8N2H3 581 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 PGM2Q96G03 612 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 COLEC11Q9BWP8 271 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 ADAM28Q9UKQ2 775 aa27.97■■■□□ 2.07
COL13A1-212ENST00000520133 ALDH2P05091 517 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 CAPN2P17655 700 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 NFE2Q16621 373 aaPredicted RBP27.96■■■□□ 2.07
COL13A1-212ENST00000520133 ARL13BQ3SXY8 428 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 SLC39A12Q504Y0 691 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 UBAP2Q5T6F2 1119 aaKnown RBP27.96■■■□□ 2.07
COL13A1-212ENST00000520133 CENPUQ71F23 418 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 ZNF771Q7L3S4 317 aaPredicted RBP27.96■■■□□ 2.07
COL13A1-212ENST00000520133 ANKRD33Q7Z3H0 272 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 CPT1BQ92523 772 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 RTP4Q96DX8 246 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 TTC25Q96NG3 672 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 MRPL9Q9BYD2 267 aaKnown RBP27.96■■■□□ 2.07
COL13A1-212ENST00000520133 MAGEB5Q9BZ81 275 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 PHACTR1Q9C0D0 580 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 HIPK3Q9H422 1215 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 DDIT4Q9NX09 232 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 NOVA2Q9UNW9 492 aaKnown RBP27.96■■■□□ 2.07
COL13A1-212ENST00000520133 VWA8A3KMH1 1905 aa27.96■■■□□ 2.07
COL13A1-212ENST00000520133 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP27.95■■■□□ 2.07
COL13A1-212ENST00000520133 TLDC2A0PJX2 215 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 DCDC2CA8MYV0 355 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 KCNN4O15554 427 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 ATN1P54259 1190 aaPredicted RBP27.95■■■□□ 2.07
COL13A1-212ENST00000520133 BSPRYQ5W0U4 402 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 BEND5Q7L4P6 421 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 NPAS4Q8IUM7 802 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 STMN4Q9H169 189 aaPredicted RBP27.95■■■□□ 2.07
COL13A1-212ENST00000520133 USP29Q9HBJ7 922 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 SAYSD1Q9NPB0 183 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 PAK5Q9P286 719 aa27.95■■■□□ 2.07
COL13A1-212ENST00000520133 RASGRF2O14827 1237 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 AMPD1P23109 780 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 ADRA1BP35368 520 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 SCAPQ12770 1279 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 SLC39A5Q6ZMH5 540 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 NAT8LQ8N9F0 302 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 ADAM32Q8TC27 787 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 RNF139Q8WU17 664 aa27.95■■■□□ 2.06
COL13A1-212ENST00000520133 FUBP3Q96I24 572 aaKnown RBP eCLIP27.95■■■□□ 2.06
COL13A1-212ENST00000520133 WDR6Q9NNW5 1121 aaKnown RBP27.95■■■□□ 2.06
COL13A1-212ENST00000520133 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.95■■■□□ 2.06
COL13A1-212ENST00000520133 ZNF638Q14966 1978 aaKnown RBP27.94■■■□□ 2.06
COL13A1-212ENST00000520133 RGS16O15492 202 aaPredicted RBP27.94■■■□□ 2.06
COL13A1-212ENST00000520133 BASP1P80723 227 aaKnown RBP27.94■■■□□ 2.06
COL13A1-212ENST00000520133 VARS2Q5ST30 1063 aaKnown RBP27.94■■■□□ 2.06
COL13A1-212ENST00000520133 NCBP2-AS2Q69YL0 99 aa27.94■■■□□ 2.06
COL13A1-212ENST00000520133 CTU1Q7Z7A3 348 aaKnown RBP27.94■■■□□ 2.06
COL13A1-212ENST00000520133 EDEM1Q92611 657 aa27.94■■■□□ 2.06
COL13A1-212ENST00000520133 SCLYQ96I15 445 aa27.94■■■□□ 2.06
COL13A1-212ENST00000520133 CAPS2Q9BXY5 557 aa27.94■■■□□ 2.06
COL13A1-212ENST00000520133 FBXW11Q9UKB1 542 aa27.94■■■□□ 2.06
COL13A1-212ENST00000520133 CXCL10P02778 98 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 OR4Q2P0C623 313 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 RBL1P28749 1068 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 GBE1Q04446 702 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 HIF1AQ16665 826 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 SKIDA1Q1XH10 827 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 C4orf22Q6V702 233 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 C9orf72Q96LT7 481 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 CCDC77Q9BR77 488 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 LRRC4CQ9HCJ2 640 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 ARHGEF4Q9NR80 690 aa27.93■■■□□ 2.06
COL13A1-212ENST00000520133 SLC5A3P53794 718 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 ARL4CP56559 192 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 SLC45A4Q5BKX6 768 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 FAM171A1Q5VUB5 890 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 B4GALNT4Q76KP1 1039 aa27.92■■■□□ 2.06
COL13A1-212ENST00000520133 ABI2Q9NYB9 513 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-212ENST00000520133 COL4A4P53420 1690 aaPredicted RBP27.92■■■□□ 2.06
COL13A1-212ENST00000520133 EEF2KO00418 725 aaKnown RBP27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms