RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 PRDM8Q9NQV8 689 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 UBE2J1Q9Y385 318 aaPredicted RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 INSL6Q9Y581 213 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 DMRT1Q9Y5R6 373 aa5.17□□□□□ -1.58
SQLE-202ENST00000518604 WDR33Q9C0J8 1336 aaKnown RBP5.17□□□□□ -1.58
SQLE-202ENST00000518604 LARGE1O95461 756 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 DHRS4L1P0CG22 281 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 MATN1P21941 496 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 YY1P25490 414 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 PSG6Q00889 435 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 CFHR3Q02985 330 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 DEUP1Q05D60 604 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 CCDC15Q0P6D6 951 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 LMAN2Q12907 356 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 RAPGEF1Q13905 1077 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 TMEM95Q3KNT9 176 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 TSTD2Q5T7W7 516 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 MSANTD2Q6P1R3 559 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 NFRKBQ6P4R8 1299 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 LINC01465Q8N7H1 131 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 TERB1Q8NA31 727 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 SLC16A11Q8NCK7 471 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 MYRIPQ8NFW9 859 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 TBC1D20Q96BZ9 403 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 SDCCAG3Q96C92 435 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 DAZAP1Q96EP5 407 aaKnown RBP5.16□□□□□ -1.58
SQLE-202ENST00000518604 POLR3GLQ9BT43 218 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 SORBS1Q9BX66 1292 aaKnown RBP5.16□□□□□ -1.58
SQLE-202ENST00000518604 SAYSD1Q9NPB0 183 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 FBXO28Q9NVF7 368 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 LPAR3Q9UBY5 353 aa5.16□□□□□ -1.58
SQLE-202ENST00000518604 H7C1Q1 480 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 ZNF213O14771 459 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 IRAK2O43187 625 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 SUV39H1O43463 412 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 HNRNPCP07910 306 aaKnown RBP eCLIP5.15□□□□□ -1.59
SQLE-202ENST00000518604 TMIGD3P0DMS9 266 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 GPD1P21695 349 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 KLRK1P26718 216 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 CST5P28325 142 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 PPM1FP49593 454 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 PPFIA1Q13136 1202 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 BFSP2Q13515 415 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 CBFBQ13951 182 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 P3H1Q32P28 736 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 AKNAD1Q5T1N1 836 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 SULT6B1Q6IMI4 303 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 LIN54Q6MZP7 749 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 JMJD6Q6NYC1 403 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 ACSM6Q6P461 480 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 LDHAL6AQ6ZMR3 332 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 TRIM72Q6ZMU5 477 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 KRT27Q7Z3Y8 459 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 CERS3Q8IU89 383 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 SMAP1Q8IYB5 467 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 CPXCR1Q8N123 301 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 PPM1EQ8WY54 764 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 SARAFQ96BY9 339 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 EDC3Q96F86 508 aaKnown RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 FAR2Q96K12 515 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 CIPCQ9C0C6 399 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 SCAND2PQ9GZW5 306 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 SYNPO2LQ9H987 977 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 KCNK9Q9NPC2 374 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 ING1Q9UK53 422 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 ASAP1Q9ULH1 1129 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 FZD4Q9ULV1 537 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 C19orf53Q9UNZ5 99 aaPredicted RBP5.15□□□□□ -1.59
SQLE-202ENST00000518604 SPATA31A1Q5TZJ5 1347 aa5.15□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A18PA6NE21 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A16PA6NEW6 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A9PA6NNJ1 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A5PA8MXJ8 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 BTBD19C9JJ37 291 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 H3BNC9 293 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 IPO5O00410 1097 aaKnown RBP5.14□□□□□ -1.59
SQLE-202ENST00000518604 MGST3O14880 152 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 PROP1O75360 226 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM155BO75949 473 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 CER1O95813 267 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 MT-CO3P00414 261 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A15PP0C7V4 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM90A14PP0C7W9 464 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 DUSP1P28562 367 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 AKT1P31749 480 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 PNLIPRP1P54315 467 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 CYP4F2P78329 520 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 GPC5P78333 572 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 POSTNQ15063 836 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 FAM187BQ17R55 369 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 TBRG1Q3YBR2 411 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 ZNF569Q5MCW4 686 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 KIRREL2Q6UWL6 708 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 BCDIN3DQ7Z5W3 292 aaKnown RBP5.14□□□□□ -1.59
SQLE-202ENST00000518604 ZNF354CQ86Y25 554 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 OR52L2PQ8NGH6 319 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 OR1N1Q8NGS0 311 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 GPR150Q8NGU9 434 aa5.14□□□□□ -1.59
SQLE-202ENST00000518604 OR6Y1Q8NGX8 325 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms