RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 FBXO42Q6P3S6 717 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 GGT6Q6P531 493 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 PIK3AP1Q6ZUJ8 805 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ARHGEF25Q86VW2 580 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 P3H2Q8IVL5 708 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 FAM71DQ8N9W8 422 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ATG16L2Q8NAA4 619 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ADAMTS18Q8TE60 1221 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 MORC4Q8TE76 937 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 STYXQ8WUJ0 223 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 LTV1Q96GA3 475 aaPredicted RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 KAZALD1Q96I82 304 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 FYTTD1Q96QD9 318 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 MMS19Q96T76 1030 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 AGO4Q9HCK5 861 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 VPS45Q9NRW7 570 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 DACT1Q9NYF0 836 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 SEMA5BQ9P283 1151 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 SERGEFQ9UGK8 458 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 HERC5Q9UII4 1024 aaKnown RBP4.27□□□□□ -1.73
VPS13B-207ENST00000518569 ASAP1Q9ULH1 1129 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 FZD4Q9ULV1 537 aa4.27□□□□□ -1.73
VPS13B-207ENST00000518569 COL11A2P13942 1736 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-207ENST00000518569 AOX1Q06278 1338 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TCRBV5S1A1TA0A578 114 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 POC1B-GALNT4F8VUJ3 575 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 ACKR2O00590 384 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 EXOC3O60645 756 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TMIGD3P0DMS9 266 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-207ENST00000518569 DRD1P21728 446 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 MATN1P21941 496 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 GRK6P43250 576 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TRAPPC10P48553 1259 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 PTH2RP49190 550 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 CDK7P50613 346 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 RENBPP51606 427 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 GPC5P78333 572 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 KRTAP1-1Q07627 177 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TRIM14Q14142 442 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 GRM4Q14833 912 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TUBB8Q3ZCM7 444 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 MSANTD2Q6P1R3 559 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 PTF1AQ7RTS3 328 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 AMIGO2Q86SJ2 522 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 TRABD2AQ86V40 505 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 GALNT4Q8N4A0 578 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 ZG16BQ96DA0 208 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 PSMD1Q99460 953 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 EIF3CQ99613 913 aaKnown RBP4.26□□□□□ -1.73
VPS13B-207ENST00000518569 MACROD1Q9BQ69 325 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 HERPUD2Q9BSE4 406 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 RNF26Q9BY78 433 aaPredicted RBP4.26□□□□□ -1.73
VPS13B-207ENST00000518569 R3HDMLQ9H3Y0 253 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 EPS8L2Q9H6S3 715 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 FSCN3Q9NQT6 498 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 ASIC5Q9NY37 505 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 SH3BP4Q9P0V3 963 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 LPAR3Q9UBY5 353 aa4.26□□□□□ -1.73
VPS13B-207ENST00000518569 LRRC3CA6NJW4 275 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 UBE2Q2LH0YL09 131 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 CA12O43570 354 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 DNPH1O43598 174 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 PPFIA2O75334 1257 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 USP1O94782 785 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 TNFRSF6BO95407 300 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 MBPP02686 304 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 CHRM5P08912 532 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 ATF7P17544 494 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 YY1P25490 414 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 DUSP1P28562 367 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 CHKAP35790 457 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 IGHMBP2P38935 993 aaKnown RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 COPB1P53618 953 aaKnown RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 BFSP2Q13515 415 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 LARS2Q15031 903 aaKnown RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 FAM187BQ17R55 369 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 PROSER3Q2NL68 480 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 ATPAF1Q5TC12 328 aaPredicted RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 RINT1Q6NUQ1 792 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 ACSM6Q6P461 480 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC174Q6PII3 467 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 RINLQ6ZS11 566 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 RD3Q7Z3Z2 195 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 ADGRG3Q86Y34 549 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 SMC5Q8IY18 1101 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 NKAPQ8N5F7 415 aaKnown RBP4.25□□□□□ -1.73
VPS13B-207ENST00000518569 SEMA6DQ8NFY4 1073 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 OR52L2PQ8NGH6 319 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 STT3BQ8TCJ2 826 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 HASPINQ8TF76 798 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 TRAPPC12Q8WVT3 735 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 GLMPQ8WWB7 406 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 CCDC17Q96LX7 622 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 RTKNQ9BST9 563 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 MAGEH1Q9H213 219 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 SAP30LQ9HAJ7 183 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 USP29Q9HBJ7 922 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 KCNK9Q9NPC2 374 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 FBXO28Q9NVF7 368 aa4.25□□□□□ -1.73
VPS13B-207ENST00000518569 LRFN1Q9P244 771 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms