RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 NXF1Q9UBU9 619 aaKnown RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 FTSJ1Q9UET6 329 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 KNTC1P50748 2209 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 FRMD3A2A2Y4 597 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 PCDHGA12O60330 932 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 CST3P01034 146 aaPredicted RBP12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 CDK4P11802 303 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ACO1P21399 889 aaKnown RBP12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 GJB2P29033 226 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ATICP31939 592 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 EIF2S3P41091 472 aaKnown RBP12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 IL12RB1P42701 662 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 GRIA4P48058 902 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ENPP2Q13822 863 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 KIF19Q2TAC6 998 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 CCDC73Q6ZRK6 1079 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 CCDC65Q8IXS2 484 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 FCRL3Q96P31 734 aaPredicted RBP12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 CGRRF1Q99675 332 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 PRORYQ9H606 182 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 OSGEPQ9NPF4 335 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 PLK2Q9NYY3 685 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 FBXO10Q9UK96 956 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ANKRD6Q9Y2G4 727 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF510Q9Y2H8 683 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 SNX11Q9Y5W9 270 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 MYLKQ15746 1914 aa12.33□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF462Q96JM2 2506 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 PLK4O00444 970 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 DFNA5O60443 496 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 TBX18O95935 607 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 EPHX1P07099 455 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 TRIM21P19474 475 aaKnown RBP12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 ITPKBP27987 946 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 CHKAP35790 457 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 STAT6P42226 847 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 PLA2G4AP47712 749 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 MFAP3P55082 362 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 ARID5AQ03989 594 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 PSMD6Q15008 389 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 EIF4HQ15056 248 aaKnown RBP12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 KLHDC10Q6PID8 442 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 USP49Q70CQ1 688 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 ANKS1BQ7Z6G8 1248 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 ADAT2Q7Z6V5 191 aaKnown RBP12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 TADA2BQ86TJ2 420 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 FAM124AQ86V42 546 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 CACUL1Q86Y37 369 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 CCDC127Q96BQ5 260 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 FGFBP2Q9BYJ0 223 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 TRIM9Q9C026 710 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 DNMT3LQ9UJW3 386 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 PCDHGA1Q9Y5H4 931 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 RAI2Q9Y5P3 530 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 AK5Q9Y6K8 562 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 PTPRQQ9UMZ3 2332 aa12.32□□□□□ -0.44
TMEM55A-202ENST00000518359 NUMA1Q14980 2115 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 TEX51A0A1B0GUA7 166 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 PHACTR2O75167 634 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 PENKP01210 267 aaPredicted RBP12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 CYBBP04839 570 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 JUPP14923 745 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 COPAP53621 1224 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 MYL6P60660 151 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 SEMG2Q02383 582 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF234Q14588 700 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 GEN1Q17RS7 908 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF667Q5HYK9 610 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 SERPINA13PQ6UXR4 307 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 PAQR9Q6ZVX9 377 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 FUKQ8N0W3 1084 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 RDH13Q8NBN7 331 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 OR2T3Q8NH03 318 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 SMYD3Q9H7B4 428 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 CSNK1G1Q9HCP0 422 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 TM9SF3Q9HD45 589 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 SCML2Q9UQR0 700 aa12.31□□□□□ -0.44
TMEM55A-202ENST00000518359 PLXNA2O75051 1894 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 PAPSS1O43252 624 aaPredicted RBP12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 RFPL3O75679 317 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 C1SP09871 688 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 P4HA1P13674 534 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 PGFP49763 221 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 PSEN1P49768 467 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 MAP3K7CLP57077 242 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 CYP24A1Q07973 514 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF699Q32M78 642 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 C10orf120Q5SQS8 335 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 LARP1BQ659C4 914 aaKnown RBP12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 Q6ZNB5 142 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 GPR155Q7Z3F1 870 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 ACOT1Q86TX2 421 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 ZNF843Q8N446 348 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 ZMIZ2Q8NF64 920 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 SLC2A14Q8TDB8 520 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 SMOQ99835 787 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 DCLK3Q9C098 648 aa12.3□□□□□ -0.44
TMEM55A-202ENST00000518359 LRRC27Q9C0I9 530 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms