RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 A0A087WV62 115 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 TCRBV16S1A1N1A0A5B0 115 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 MYMKA6NI61 221 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 TBKBP1A7MCY6 615 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 GOLGA6L6A8MZA4 724 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 TSPAN1O60635 241 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 LRRN2O75325 713 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PPM1BO75688 479 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 TBX18O95935 607 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 DNTTP04053 509 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PRKCBP05771 671 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CA3P07451 260 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 AXLP30530 894 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 HOXA11P31270 313 aaPredicted RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 PREPP48147 710 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PTENP60484 403 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ASIC1P78348 528 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 SMAD3P84022 425 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 MBTD1Q05BQ5 628 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 MTA1Q13330 715 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 RAB30Q15771 203 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 LRIT3Q3SXY7 679 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PAN2Q504Q3 1202 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 SPOUT1Q5T280 376 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 ANKRD34AQ69YU3 496 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CDPF1Q6NVV7 123 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 LETMD1Q6P1Q0 360 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 NOTUMQ6P988 496 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 SEZ6L2Q6UXD5 910 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 HAUS6Q7Z4H7 955 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ADAT2Q7Z6V5 191 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 LCA5Q86VQ0 697 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CDR2LQ86X02 465 aaPredicted RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 TRIM59Q8IWR1 403 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CCDC65Q8IXS2 484 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 GRAMD1CQ8IYS0 662 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ABI1Q8IZP0 508 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 DAW1Q8N136 415 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ESX1Q8N693 406 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ARL6IP6Q8N6S5 226 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CNNM3Q8NE01 707 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ADCY4Q8NFM4 1077 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ADAMTS18Q8TE60 1221 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 LRRC15Q8TF66 581 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 BTN2A2Q8WVV5 523 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 ASB12Q8WXK4 309 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 MRPS27Q92552 414 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 TOP1MTQ969P6 601 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PPP1R14AQ96A00 147 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 BICD1Q96G01 975 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PYM1Q9BRP8 204 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 APOL6Q9BWW8 343 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 GTPBP4Q9BZE4 634 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 MKRN2Q9H000 416 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 ABCG4Q9H172 646 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 BLZF1Q9H2G9 400 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 NKX2-4Q9H2Z4 354 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CUEDC2Q9H467 287 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 GOLPH3LQ9H4A5 285 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 BRD9Q9H8M2 597 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 MRPL44Q9H9J2 332 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 CERS4Q9HA82 394 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 C17orf75Q9HAS0 396 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PARVGQ9HBI0 331 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 SSU72Q9NP77 194 aaKnown RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 EMC7Q9NPA0 242 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PANK4Q9NVE7 773 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PRMT7Q9NVM4 692 aaPredicted RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 DACT1Q9NYF0 836 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 CAMSAP3Q9P1Y5 1249 aaPredicted RBP2.96□□□□□ -1.94
SKP1-204ENST00000517691 TBK1Q9UHD2 729 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 MTUS1Q9ULD2 1270 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 INSL6Q9Y581 213 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 PCDHA11Q9Y5I1 949 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 SCN10AQ9Y5Y9 1956 aa2.96□□□□□ -1.94
SKP1-204ENST00000517691 RANBP2P49792 3224 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 DOCK5Q9H7D0 1870 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 A0A0U1RQF3 1178 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 A0A1W2PQ27 194 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 A0A1W2PQ64 194 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 A0A1W2PQD8 194 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 LCHNA4D1U4 455 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 B4E171 279 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 H0YCG3 227 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ACKR2O00590 384 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 N4BP3O15049 544 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 KPNA5O15131 536 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 P4HA2O15460 535 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 OFD1O75665 1012 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ZNF202O95125 648 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 GJB5O95377 273 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 GCNT3O95395 438 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 NFICP08651 508 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 HARSP12081 509 aaKnown RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 CKMT1AP12532 417 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ITGA4P13612 1032 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 GAP43P17677 238 aa2.95□□□□□ -1.94
SKP1-204ENST00000517691 ARF4P18085 180 aaPredicted RBP2.95□□□□□ -1.94
SKP1-204ENST00000517691 TNFSF4P23510 183 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms