RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 GPSM1Q86YR5 675 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 CADM3Q8N126 398 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 GSTCDQ8NEC7 633 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 RASGRP4Q8TDF6 673 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 FAM216AQ8WUB2 273 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 RSAD2Q8WXG1 361 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 THAP4Q8WY91 577 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 MOCOSQ96EN8 888 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 C18orf12Q96KH6 178 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 ART5Q96L15 291 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 C17orf77Q96MU5 243 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZIM3Q96PE6 472 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 FCRL5Q96RD9 977 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 WNT8AQ9H1J5 351 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 MS4A5Q9H3V2 200 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 MAP6D1Q9H9H5 199 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 GPR83Q9NYM4 423 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 JKAMPQ9P055 326 aa-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 H2AFY2Q9P0M6 372 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZNF256Q9Y2P7 627 aaPredicted RBP-0.39□□□□□ -2.47
RNU6-539P-201ENST00000516665 TRBV23-1A0A0A0MS06 115 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 TCRBV16S1A1N1A0A5B0 115 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 CCP110O43303 1012 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 ARHGEF9O43307 516 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 LATO43561 262 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 VPS4BO75351 444 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 SOAT2O75908 522 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 KIF20AO95235 890 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 VNN1O95497 513 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 NPTXRO95502 500 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 TUBBP07437 444 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 DDCP20711 480 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 UBA1P22314 1058 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 CD40P25942 277 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 GCLCP48506 637 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 DIO1P49895 249 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 PMS2P54278 862 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 MANFP55145 182 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 SUMO1P63165 101 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 TUBB4BP68371 445 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 GAD2Q05329 585 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 TRAF2Q12933 501 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 GPR18Q14330 331 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 LRRC32Q14392 662 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 SEPT2Q15019 361 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 FXNQ16595 210 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 LDLRAD1Q5T700 205 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 DCAF12L1Q5VU92 463 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 RTN4RL2Q86UN3 420 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 ANKRD44Q8N8A2 993 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 NEXN-AS1Q8NBZ9 246 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 CCHCR1Q8TD31 782 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 FEM1CQ96JP0 617 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 SPATA32Q96LK8 384 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 IWS1Q96ST2 819 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 SDHCQ99643 169 aaPredicted RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 WDR83Q9BRX9 315 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 FSD1Q9BTV5 496 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 MRPL46Q9H2W6 279 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 KCTD10Q9H3F6 313 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 FBRSL1Q9HCM7 1045 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 TCF7L1Q9HCS4 588 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 RALYQ9UKM9 306 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 KLK13Q9UKR3 277 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 RARRES3Q9UL19 164 aa-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 ZNFX1Q9P2E3 1918 aaKnown RBP-0.4□□□□□ -2.47
RNU6-539P-201ENST00000516665 IGLV5-52A0A0A0MRZ9 124 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 MAGEA13PA6NCF6 341 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 IQCA1LA6NCM1 817 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 HMX3A6NHT5 357 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 CLIC1O00299 241 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 PRKCBP05771 671 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 LPLP06858 475 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 ARSBP15848 533 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 TSHRP16473 764 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 KCNA5P22460 613 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 RPS6KB1P23443 525 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 RBMXP38159 391 aaKnown RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 CCR10P46092 362 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 ZNF132P52740 706 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLC12A2P55011 1212 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 GNB1P62873 340 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 COX10Q12887 443 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 PLEKHO1Q53GL0 409 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 DNTTIP2Q5QJE6 756 aaKnown RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 TUBA1AQ71U36 451 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 FGD2Q7Z6J4 655 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 ADGRF4Q8IZF3 695 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 NFAM1Q8NET5 270 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 HCAR2Q8TDS4 363 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 TAAR8Q969N4 342 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 BICD1Q96G01 975 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 KAZALD1Q96I82 304 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 PAWRQ96IZ0 340 aaKnown RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 HS6ST2Q96MM7 605 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 DPCDQ9BVM2 203 aaPredicted RBP-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 PIF1Q9H611 641 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 UBTD1Q9HAC8 227 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 SLAMF7Q9NQ25 335 aa-0.41□□□□□ -2.48
RNU6-539P-201ENST00000516665 DMRT3Q9NQL9 472 aa-0.41□□□□□ -2.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms