RNA–Protein interactions for RNA: ENST00000513868.6

PVT1-203, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,699 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-203ENST00000513868 ANKS3Q6ZW76 656 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 STKLD1Q8NE28 680 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 NTAN1Q96AB6 310 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 IGSF21Q96ID5 467 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 CSPG4P5Q96PW8 444 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 TTPALQ9BTX7 342 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 FAM129AQ9BZQ8 928 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 ADAM7Q9H2U9 754 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 IL37Q9NZH6 218 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 COX16Q9P0S2 106 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 DOCK4Q8N1I0 1966 aa13.35□□□□□ -0.27
PVT1-203ENST00000513868 MYO18AQ92614 2054 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 MTMR11A4FU01 709 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 H7C4K7 107 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 APOL1O14791 398 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 HSPA1AP0DMV8 641 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 HSPA1BP0DMV9 641 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 ACRP10323 421 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 GOT1P17174 413 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 TGM2P21980 687 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ADRA1BP35368 520 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 HSD17B3P37058 310 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 GGCXP38435 758 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ADCY8P40145 1251 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 VPS41P49754 854 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 GDF10P55107 478 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 EIF3EP60228 445 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 YWHAGP61981 247 aaKnown RBP eCLIP13.34□□□□□ -0.27
PVT1-203ENST00000513868 DHX9Q08211 1270 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 SCAPQ12770 1279 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ALS2CLQ60I27 953 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 RNF19BQ6ZMZ0 732 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ZNF365Q70YC5 407 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 GSTA5Q7RTV2 222 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 UBE2Q1Q7Z7E8 422 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 UNC45BQ8IWX7 931 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 P3H4Q92791 437 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 NMUR1Q9HB89 426 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 AAASQ9NRG9 546 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 DDIT4Q9NX09 232 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 FBXW11Q9UKB1 542 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 SHROOM3Q8TF72 1996 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 GOLGA6BA6NDN3 693 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 TRIM66O15016 1216 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ADAM12O43184 909 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 RBP3P10745 1247 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ATF2P15336 505 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 RAG1P15918 1043 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 CAPN2P17655 700 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 CXCR3P49682 368 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ITGA8P53708 1063 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 AIF1P55008 147 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ARPP19P56211 112 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 USP46P62068 366 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 IFRD2Q12894 506 aaPredicted RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 SLC10A2Q12908 348 aaPredicted RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 CALCOCO2Q13137 446 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 SEMA3BQ13214 749 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 C1orf228Q6PIY5 440 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 KCNT2Q6UVM3 1135 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 TAC4Q86UU9 113 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 TRAF3IP1Q8TDR0 691 aaPredicted RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 DQX1Q8TE96 717 aaKnown RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 LRRC45Q96CN5 670 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ZIM3Q96PE6 472 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 TMEM106CQ9BVX2 250 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 OXCT2Q9BYC2 517 aaPredicted RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 EPB41L4BQ9H329 900 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 PCDH9Q9HC56 1237 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ABCC13Q9NSE7 274 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 OSER1Q9NX31 292 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.34□□□□□ -0.272e-8■■□□□ 12.1
PVT1-203ENST00000513868 RCOR3Q9P2K3 495 aaPredicted RBP13.34□□□□□ -0.27
PVT1-203ENST00000513868 MTRRQ9UBK8 725 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 SCML2Q9UQR0 700 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 SLC27A5Q9Y2P5 690 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 MFHAS1Q9Y4C4 1052 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 ANAPC1Q9H1A4 1944 aa13.34□□□□□ -0.27
PVT1-203ENST00000513868 PLXNA4Q9HCM2 1894 aa13.33□□□□□ -0.27
PVT1-203ENST00000513868 LAMA2P24043 3122 aaKnown RBP13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM92AA1XBS5 289 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM72CH0Y354 149 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 H0YGN5 161 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 SGK1O00141 431 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 MCF2LO15068 1137 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 SOAT2O75908 522 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 F9P00740 461 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 CPB1P15086 417 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 AMPD1P23109 780 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 P3H1Q32P28 736 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 USP41Q3LFD5 358 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM72AQ5TYM5 149 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 SLC8B1Q6J4K2 584 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM72DQ6L9T8 149 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM117BQ6P1L5 589 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 B4GALNT4Q76KP1 1039 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 C16orf59Q7L2K0 433 aa13.33□□□□□ -0.28
PVT1-203ENST00000513868 FAM72BQ86X60 149 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms