RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 EGFLAMQ63HQ2 1017 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 CEP135Q66GS9 1140 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 SCARA5Q6ZMJ2 495 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 TPGS1Q6ZTW0 290 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 MIB1Q86YT6 1006 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 TRIML1Q8N9V2 468 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 GATA6Q92908 595 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 MRGPRX1Q96LB2 322 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 NIF3L1Q9GZT8 377 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 ITM2CQ9NQX7 267 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 KIAA1549LQ6ZVL6 1849 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 ABCA7Q8IZY2 2146 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 C1QTNF9BB2RNN3 333 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 PRRT4C9JH25 899 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 STX10O60499 249 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 CYBBP04839 570 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 C1QTNF9P0C862 333 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 NDUFV2P19404 249 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 ADORA2BP29275 332 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 PIK3CAP42336 1068 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 PGFP49763 221 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 SLC8A3P57103 927 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 ZNF445P59923 1031 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 SIM1P81133 766 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-216ENST00000512683 PDE4CQ08493 712 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 ENPP2Q13822 863 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 EIF4HQ15056 248 aaKnown RBP13.21□□□□□ -0.29
VEGFA-216ENST00000512683 ARMCX6Q7L4S7 300 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 SCD5Q86SK9 330 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 GUF1Q8N442 669 aaKnown RBP13.21□□□□□ -0.29
VEGFA-216ENST00000512683 DNASE2BQ8WZ79 361 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 WBP2Q969T9 261 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 CCDC34Q96HJ3 373 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 IRX2Q9BZI1 471 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-216ENST00000512683 PCED1AQ9H1Q7 454 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 TMEM8AQ9HCN3 771 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 FAM49BQ9NUQ9 324 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 OSER1Q9NX31 292 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 THAP10Q9P2Z0 257 aaPredicted RBP13.21□□□□□ -0.29
VEGFA-216ENST00000512683 NAGPAQ9UK23 515 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 STRIP2Q9ULQ0 834 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 MAPK8IP1Q9UQF2 711 aa13.21□□□□□ -0.29
VEGFA-216ENST00000512683 MYOFQ9NZM1 2061 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 A0A1W2PQH9 124 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 TRIM24O15164 1050 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 STC2O76061 302 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 C7P10643 843 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 NR2F2P24468 414 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 CD6P30203 668 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 ADAM9Q13443 819 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 KRT39Q6A163 491 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 CPXM2Q8N436 756 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
VEGFA-216ENST00000512683 ACOX2Q99424 681 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 GTPBP2Q9BX10 602 aaKnown RBP13.2□□□□□ -0.3
VEGFA-216ENST00000512683 NMUR1Q9HB89 426 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 ZDHHC4Q9NPG8 344 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 STON1Q9Y6Q2 735 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 EML5Q05BV3 1969 aa13.2□□□□□ -0.3
VEGFA-216ENST00000512683 A0A1B0GTW7 788 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 CYP26A1O43174 497 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 SYNCRIPO60506 623 aaKnown RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 IGLV3-19P01714 112 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 CD59P13987 128 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 WASP42768 502 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 GCLMP48507 274 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 MFAP3P55082 362 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 EDRF1Q3B7T1 1238 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 ZCWPW2Q504Y3 356 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 ARHGAP17Q68EM7 881 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 PM20D1Q6GTS8 502 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 SPOPLQ6IQ16 392 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 KIAA1211LQ6NV74 962 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 IL27RAQ6UWB1 636 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 TOGARAM2Q6ZUX3 1019 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 GPRIN1Q7Z2K8 1008 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 SLC41A1Q8IVJ1 513 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 FAM186BQ8IYM0 893 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 RGL4Q8IZJ4 473 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 FMR1NBQ8N0W7 255 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 TAS1R2Q8TE23 839 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 HSPA12BQ96MM6 686 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 NUP58Q9BVL2 599 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 PRDM16Q9HAZ2 1276 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 APOBEC3GQ9HC16 384 aaKnown RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 ELOVL2Q9NXB9 296 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 WSB2Q9NYS7 404 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 KIAA1522Q9P206 1035 aaPredicted RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 USP36Q9P275 1121 aaKnown RBP13.19□□□□□ -0.3
VEGFA-216ENST00000512683 KIAA1257Q9ULG3 409 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 CYP8B1Q9UNU6 501 aa13.19□□□□□ -0.3
VEGFA-216ENST00000512683 GJB3O75712 270 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 KLKB1P03952 638 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 ZNF883P0CG24 379 aa13.18□□□□□ -0.3
VEGFA-216ENST00000512683 PPP3CAQ08209 521 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms