RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 ZNF534Q76KX8 674 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 PPM1NQ8N819 430 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 OR6B3Q8NGW1 331 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 GSDMBQ8TAX9 411 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 CCDC110Q8TBZ0 833 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 C7orf26Q96N11 449 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 MYCBPQ99417 103 aaPredicted RBP9.57□□□□□ -0.88
CPNE4-210ENST00000512332 B3GNT5Q9BYG0 378 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 IQCGQ9H095 443 aaKnown RBP9.57□□□□□ -0.88
CPNE4-210ENST00000512332 ABHD16BQ9H3Z7 469 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 KCNK13Q9HB14 408 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 FAM49BQ9NUQ9 324 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 MOCS1Q9NZB8 636 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 SMIM35A0A1B0GVV1 85 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DCAF8L1A6NGE4 600 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 A8MUI8 341 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 PPEF2O14830 753 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CCDC22O60826 627 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 RFPL1O75677 317 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ZNF189O75820 626 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DGKIO75912 1065 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ALDH1A2O94788 518 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 METTL18O95568 372 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FAM163BP0C2L3 166 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ELF1P32519 619 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 GBE1Q04446 702 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SLC10A2Q12908 348 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 IRF5Q13568 498 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KIZQ2M2Z5 673 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 XKR4Q5GH76 650 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 PPP6R3Q5H9R7 873 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 EFHC1Q5JVL4 640 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FBXO47Q5MNV8 452 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 STXBP5Q5T5C0 1151 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 UNC5AQ6ZN44 842 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 PAXIP1Q6ZW49 1069 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CATSPER4Q7RTX7 472 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CCNJLQ8IV13 435 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CTAGE3PQ8IX95 158 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FAM13CQ8NE31 585 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 RFWD2Q8NHY2 731 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SKA1Q96BD8 255 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CFAP36Q96G28 342 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 OLFM3Q96PB7 478 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CSPG4P5Q96PW8 444 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 RNF181Q9P0P0 153 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SIRPGQ9P1W8 387 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 TUBGCP4Q9UGJ1 667 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 AP4E1Q9UPM8 1137 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 USP3Q9Y6I4 520 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 NRCAMQ92823 1304 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 MBLAC1A4D2B0 266 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CXorf49A8MYA2 514 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 BIRC5O15392 142 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 XPOTO43592 962 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CBX6O95503 412 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ATP5BP06576 529 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DARSP14868 501 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KCNE1P15382 129 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CRHR1P34998 444 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 GNL1P36915 607 aaPredicted RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FDFT1P37268 417 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SLC8A3P57103 927 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ACCSLQ4AC99 568 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ATG16L1Q676U5 607 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 STEAP4Q687X5 459 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KCNT2Q6UVM3 1135 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ENDOVQ8N8Q3 282 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FBXO41Q8TF61 875 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 NSMCE1Q8WV22 266 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KBTBD7Q8WVZ9 684 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 PTCD3Q96EY7 689 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 RSRC1Q96IZ7 334 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 ZNF560Q96MR9 790 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 EIF2AQ9BY44 585 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 CXCL16Q9H2A7 254 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 C12orf65Q9H3J6 166 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DHX35Q9H5Z1 703 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 RNPEPL1Q9HAU8 725 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 EIF2B3Q9NR50 452 aaKnown RBP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SMYD2Q9NRG4 433 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KCNK4Q9NYG8 393 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 HEY2Q9UBP5 337 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 DCTN4Q9UJW0 460 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 PCDHA11Q9Y5I1 949 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 KAT6AQ92794 2004 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 SF3B1O75533 1304 aaKnown RBP eCLIP9.56□□□□□ -0.88
CPNE4-210ENST00000512332 TRIP11Q15643 1979 aa9.56□□□□□ -0.88
CPNE4-210ENST00000512332 A0A0G2JND7 137 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 KPNA7A9QM74 516 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 PDHXO00330 501 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 HAUS5O94927 633 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 TFE3P19532 575 aaPredicted RBP9.55□□□□□ -0.88
CPNE4-210ENST00000512332 BGNP21810 368 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 CALB2P22676 271 aa9.55□□□□□ -0.88
CPNE4-210ENST00000512332 MATKP42679 507 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms