RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 GDF10P55107 478 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MXRA7P84157 204 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZP2Q05996 745 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SULT2A1Q06520 285 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NFIAQ12857 509 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DLG1Q12959 904 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 UGCGQ16739 394 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KHDC1Q4VXA5 237 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM240Q5SV17 173 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MARCH8Q5T0T0 291 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMTC4Q5T4D3 741 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 STEAP4Q687X5 459 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF746Q6NUN9 644 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARCQ7LC44 396 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RIC3Q7Z5B4 369 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ERICH1Q86X53 443 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TDHQ8IZJ6 230 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CBARPQ8N350 705 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GOLGA5Q8TBA6 731 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCHCR1Q8TD31 782 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RHBDF1Q96CC6 855 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LMLNQ96KR4 655 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 YPEL4Q96NS1 127 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SAMD11Q96NU1 681 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ASB2Q96Q27 587 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SH3GL1Q99961 368 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PYM1Q9BRP8 204 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 REPIN1Q9BWE0 567 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CADM1Q9BY67 442 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHACTR1Q9C0D0 580 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CPVLQ9H3G5 476 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TAS2R1Q9NYW7 299 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HES2Q9Y543 173 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTCH2Q9Y6C9 303 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CAPN7Q9Y6W3 813 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DPPA5A6NC42 116 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KDM4EB2RXH2 506 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 H7C0S8 307 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SULT1C4O75897 302 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPPINO95925 133 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FOSP01100 380 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TOP1P11387 765 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 OAS2P29728 719 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPL21P46778 160 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPHB4P54760 987 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPS8P62241 208 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZBED6P86452 979 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 INSM1Q01101 510 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CKAP4Q07065 602 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NIPAL4Q0D2K0 466 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAAP100Q0VG06 881 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRHR2Q13324 411 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LRRC14Q15048 493 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EFHC2Q5JST6 749 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNASEH2BQ5TBB1 312 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPTY2D1Q68D10 685 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC23LQ6PF05 361 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYS1Q717R9 158 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SAMD7Q7Z3H4 446 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 C2CD5Q86YS7 1000 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GALNT15Q8N3T1 639 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 STX19Q8N4C7 294 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PPM1NQ8N819 430 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TTC13Q8NBP0 860 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 IGFBPL1Q8WX77 278 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SOCS4Q8WXH5 440 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PHF21AQ96BD5 680 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 AIDAQ96BJ3 306 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MTBPQ96DY7 904 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 OTUB1Q96FW1 271 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CHMP6Q96FZ7 201 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF396Q96N95 335 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TIPINQ9BVW5 301 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DCLK3Q9C098 648 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SDCBP2Q9H190 292 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC68Q9H2F9 335 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 JMJD4Q9H9V9 463 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NEK6Q9HC98 313 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MRPL40Q9NQ50 206 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GPATCH2Q9NW75 528 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPS15L1Q9UBC2 864 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EPB41L3Q9Y2J2 1087 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAD1L1Q9Y6D9 718 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MOXD2PA6NHM9 499 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RSPH10B2B2RC85 870 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM157AC9JC47 383 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM189-UBE2V1I3L0A0 370 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 M0QZ92 97 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FBP2O00757 339 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TNFRSF10BO14763 440 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM20BO75063 409 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GUCY1B2O75343 617 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DXOO77932 396 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPN1P04843 607 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RSPH10BP0C881 870 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GUCA1AP43080 201 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD151P48509 253 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ST13P50502 369 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FBXW4P57775 412 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPL19P84098 196 aaKnown RBP1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms