RNA–Protein interactions for RNA: ENST00000511669.1

CXCL3-204, Transcript of C-X-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CXCL3, Length 1,641 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-204ENST00000511669 ATP11CQ8NB49 1132 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 EPS8L3Q8TE67 593 aaKnown RBP17.1■□□□□ 0.33
CXCL3-204ENST00000511669 CPT1BQ92523 772 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 RAB6CQ9H0N0 254 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 TRIM17Q9Y577 477 aa17.1■□□□□ 0.33
CXCL3-204ENST00000511669 I3L4J1 428 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 SYN3O14994 580 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 TFE3P19532 575 aaPredicted RBP17.09■□□□□ 0.33
CXCL3-204ENST00000511669 BDNFP23560 247 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 OR1G1P47890 313 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 NDUFV1P49821 464 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 GDF10P55107 478 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 SCAPQ12770 1279 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 NME3Q13232 169 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 HEATR6Q6AI08 1181 aaKnown RBP17.09■□□□□ 0.33
CXCL3-204ENST00000511669 PM20D1Q6GTS8 502 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 PRUNE1Q86TP1 453 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 ZBED8Q8IZ13 594 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 ZMIZ2Q8NF64 920 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 HASPINQ8TF76 798 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 PYROXD1Q8WU10 500 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 RNF139Q8WU17 664 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 C9orf72Q96LT7 481 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 RTP3Q9BQQ7 232 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 MRPL9Q9BYD2 267 aaKnown RBP17.09■□□□□ 0.33
CXCL3-204ENST00000511669 VPS37BQ9H9H4 285 aa17.09■□□□□ 0.33
CXCL3-204ENST00000511669 XPO7Q9UIA9 1087 aaKnown RBP17.09■□□□□ 0.33
CXCL3-204ENST00000511669 EXOC1LA0A1B0GW35 172 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 E7EVH7 732 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 EEF2KO00418 725 aaKnown RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 PPP1R12AO14974 1030 aaPredicted RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 TADA2AO75478 443 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 SPAG6O75602 509 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 USP17L7P0C7H9 530 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 CYP2C18P33260 490 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 CDK7P50613 346 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 SARNPP82979 210 aaKnown RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 ELAVL2Q12926 359 aaKnown RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 AUHQ13825 339 aaKnown RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 PDK1Q15118 436 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 TFB1MQ8WVM0 346 aaKnown RBP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 CENPTQ96BT3 561 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 FUBP3Q96I24 572 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 QKIQ96PU8 341 aaKnown RBP eCLIP17.08■□□□□ 0.32
CXCL3-204ENST00000511669 KCNK16Q96T55 309 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 BEGAINQ9BUH8 593 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 COLEC11Q9BWP8 271 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 TBC1D13Q9NVG8 400 aa17.08■□□□□ 0.32
CXCL3-204ENST00000511669 SYNJ2BP-COX16A0A087WUM0 186 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 YJEFN3A6XGL0 299 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 HHLA1C9JL84 531 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 E7ENQ6 273 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 NCAM2O15394 837 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 ADRA1BP35368 520 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 HCAR3P49019 387 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 MBTPS1Q14703 1052 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 LONRF1Q17RB8 773 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 CCDC142Q17RM4 750 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 CLLU1OSQ5K130 101 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 CD300LGQ6UXG3 332 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 FAM126BQ8IXS8 530 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 VPS52Q8N1B4 723 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 PKMYT1Q99640 499 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 EPAS1Q99814 870 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 SELENOSQ9BQE4 189 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 OXCT2Q9BYC2 517 aaPredicted RBP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 DDIT4Q9NX09 232 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 MTMR10Q9NXD2 777 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 COX16Q9P0S2 106 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 CALCOCO1Q9P1Z2 691 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 FETUBQ9UGM5 382 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 LGALS13Q9UHV8 139 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 NAALADL1Q9UQQ1 740 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 NRP1O14786 923 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 TRIM66O15016 1216 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 GCATO75600 419 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 OAZ2O95190 189 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 GOT1P17174 413 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 IGFBP6P24592 240 aaPredicted RBP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 RBL1P28749 1068 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 LSP1P33241 339 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 GRIK1P39086 918 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 SLCO1A2P46721 670 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 ATXN1P54253 815 aaKnown RBP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 KLHL38Q2WGJ6 581 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 PLEKHG4Q58EX7 1191 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 ARHGEF18Q6ZSZ5 1173 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 TDRPQ86YL5 185 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 PALM2Q8IXS6 379 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 ARHGAP18Q8N392 663 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 BCAS4Q8TDM0 211 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 NDRG1Q92597 394 aaKnown RBP17.07■□□□□ 0.32
CXCL3-204ENST00000511669 BRD8Q9H0E9 1235 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 EPN3Q9H201 632 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 WDCPQ9H6R7 721 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 USP29Q9HBJ7 922 aa17.07■□□□□ 0.32
CXCL3-204ENST00000511669 RAB6BQ9NRW1 208 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms