RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 ENTPD3O75355 529 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 HSPA4LO95757 839 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 SERPINE1P05121 402 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 HSD17B4P51659 736 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 ORC1Q13415 861 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 GRM2Q14416 872 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 KCNJ11Q14654 390 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 UNC5AQ6ZN44 842 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 TSHZ1Q6ZSZ6 1077 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 RBM12BQ8IXT5 1001 aaKnown RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 GSDMBQ8TAX9 411 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 CDKL2Q92772 493 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 MASTLQ96GX5 879 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PPP1R36Q96LQ0 422 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PRICKLE1Q96MT3 831 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PHF12Q96QT6 1004 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 MRPS26Q9BYN8 205 aaKnown RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 TMEM165Q9HC07 324 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 MAN1C1Q9NR34 630 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 ASNSD1Q9NWL6 643 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PIK3R2O00459 728 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 CST3P01034 146 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 FAM58BPP0C7Q3 252 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 ITGAXP20702 1163 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 RBL1P28749 1068 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 MSX2P35548 267 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 ZNF699Q32M78 642 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 FAM102AQ5T9C2 384 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 TFAP2BQ92481 460 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 APBB2Q92870 758 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PRMT6Q96LA8 375 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 SIKE1Q9BRV8 207 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 FRMD8Q9BZ67 464 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 MTMR12Q9C0I1 747 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 COPS7BQ9H9Q2 264 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 SMYD2Q9NRG4 433 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 HERC5Q9UII4 1024 aaKnown RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 C3orf70A6NLC5 250 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 SNNO75324 88 aaPredicted RBP14.79□□□□□ -0.04
TRIM41-204ENST00000508930 DGKIO75912 1065 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 CCDC166P0CW27 439 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 COX4I1P13073 169 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 NIPA2Q8N8Q9 360 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 DDI1Q8WTU0 396 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 DMTF1Q9Y222 760 aa14.79□□□□□ -0.04
TRIM41-204ENST00000508930 PSAPP07602 524 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 SERPINB5P36952 375 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 PRKCEQ02156 737 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 CDK18Q07002 472 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 PRKG1Q13976 671 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 RNF148Q8N7C7 305 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 CATSPER1Q8NEC5 780 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 POPDC2Q9HBU9 364 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 GLRA3O75311 464 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 TFAP2AP05549 437 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 EIF4BP23588 611 aaKnown RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 IDH3AP50213 366 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 TEDDM1Q5T9Z0 273 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 TRIM67Q6ZTA4 783 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 FRMD7Q6ZUT3 714 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 TAS1R3Q7RTX0 852 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 SREK1Q8WXA9 508 aaKnown RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 CCT7Q99832 543 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 GLIS2Q9BZE0 524 aaPredicted RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 USP29Q9HBJ7 922 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 NGRNQ9NPE2 291 aaKnown RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 GPATCH2LQ9NWQ4 482 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 C6orf203Q9P0P8 240 aaPredicted RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 SF3B1O75533 1304 aaKnown RBP eCLIP14.78□□□□□ -0.044e-7■■■■■ 89
TRIM41-204ENST00000508930 NEMP1O14524 444 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 XPO1O14980 1071 aaKnown RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 VILLO15195 856 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 MED7O43513 233 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 CRTAMO95727 393 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 NOMO1Q15155 1222 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 PPP6R3Q5H9R7 873 aaPredicted RBP14.78□□□□□ -0.04
TRIM41-204ENST00000508930 STRIP1Q5VSL9 837 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 NXNQ6DKJ4 435 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 ZFP28Q8NHY6 868 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 XPNPEP1Q9NQW7 623 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 CIDEBQ9UHD4 219 aa14.78□□□□□ -0.04
TRIM41-204ENST00000508930 A0A0J9YVX5 310 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 ZSCAN9O15535 394 aaPredicted RBP14.77□□□□□ -0.04
TRIM41-204ENST00000508930 RALBP11234 206 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 ENO3P13929 434 aaPredicted RBP14.77□□□□□ -0.04
TRIM41-204ENST00000508930 TYK2P29597 1187 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 PGM5Q15124 567 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 MYLK3Q32MK0 819 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 FAM47CQ5HY64 1035 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 OR6B2Q6IFH4 312 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 PHTF2Q8N3S3 785 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 PLEKHG4BQ96PX9 1271 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 RNPEPQ9H4A4 650 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 PNPLA8Q9NP80 782 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 ARHGAP28Q9P2N2 729 aa14.77□□□□□ -0.04
TRIM41-204ENST00000508930 GRAP2O75791 330 aa14.77□□□□□ -0.05
TRIM41-204ENST00000508930 GABRB2P47870 512 aa14.77□□□□□ -0.05
TRIM41-204ENST00000508930 EMC2Q15006 297 aa14.77□□□□□ -0.05
TRIM41-204ENST00000508930 ACAP1Q15027 740 aa14.77□□□□□ -0.05
TRIM41-204ENST00000508930 SLC27A3Q5K4L6 730 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms