RNA–Protein interactions for RNA: ENST00000508902.5

CLDND1-220, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 916 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-220ENST00000508902 TAF3Q5VWG9 929 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 SYPL2Q5VXT5 272 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 RSRC2Q7L4I2 434 aaKnown RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 DQX1Q8TE96 717 aaKnown RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 NELL1Q92832 810 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 OTUB2Q96DC9 234 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 RTN4Q9NQC3 1192 aaKnown RBP19■□□□□ 0.63
CLDND1-220ENST00000508902 ABCC13Q9NSE7 274 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 NAALADL1Q9UQQ1 740 aa19■□□□□ 0.63
CLDND1-220ENST00000508902 ZNF292O60281 2723 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 K7ESF4 209 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 NCAM2O15394 837 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 RNF40O75150 1001 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 GFPT2O94808 682 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 MMEP08473 750 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 DGKKQ5KSL6 1271 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 OLFML1Q6UWY5 402 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 FAM183BPQ6ZVS7 135 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 FAM217AQ8IXS0 508 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 CDK5RAP1Q96SZ6 601 aaKnown RBP18.99■□□□□ 0.63
CLDND1-220ENST00000508902 NAT10Q9H0A0 1025 aaKnown RBP18.99■□□□□ 0.63
CLDND1-220ENST00000508902 MARK1Q9P0L2 795 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 GVINP1Q7Z2Y8 2422 aa18.99■□□□□ 0.63
CLDND1-220ENST00000508902 A0A1B0GTH6 734 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 IGLV3-25P01717 112 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 CDK11BP21127 795 aaKnown RBP18.98■□□□□ 0.63
CLDND1-220ENST00000508902 ACADSBP45954 432 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 FMO1Q01740 532 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 KDSRQ06136 332 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 EIF4EBP2Q13542 120 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-220ENST00000508902 LRRC32Q14392 662 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 C2CD6Q53TS8 623 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 OTUD1Q5VV17 481 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-220ENST00000508902 E4F1Q66K89 784 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-220ENST00000508902 MAMSTRQ6ZN01 415 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 TPGS1Q6ZTW0 290 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 TADA2BQ86TJ2 420 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 TAC4Q86UU9 113 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 DENND1CQ8IV53 801 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 NAT16Q8N8M0 369 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 ADAM32Q8TC27 787 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 ATOH1Q92858 354 aaPredicted RBP18.98■□□□□ 0.63
CLDND1-220ENST00000508902 MYEOVQ96EZ4 313 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 PPP1R13BQ96KQ4 1090 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 CLEC4EQ9ULY5 219 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 R4GN57 208 aa18.98■□□□□ 0.63
CLDND1-220ENST00000508902 LAMTOR5O43504 91 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 TULP3O75386 442 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 ADH1CP00326 375 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 DRD1P21728 446 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 SOX5P35711 763 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 NBL1P41271 181 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 SGSHP51688 502 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 NOMO3P69849 1222 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 COG7P83436 770 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 CSTF1Q05048 431 aaKnown RBP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 GRSF1Q12849 480 aaKnown RBP eCLIP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 FYB2Q5VWT5 728 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 TOGARAM2Q6ZUX3 1019 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 SPEM1Q8N4L4 309 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 BAP1Q92560 729 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 BHMTQ93088 406 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 PLD4Q96BZ4 506 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 FCRL2Q96LA5 508 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 ZDHHC4Q9NPG8 344 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 OLA1Q9NTK5 396 aaKnown RBP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 PLK2Q9NYY3 685 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 CALCOCO1Q9P1Z2 691 aa18.97■□□□□ 0.63
CLDND1-220ENST00000508902 LSM7Q9UK45 103 aaKnown RBP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 HBS1LQ9Y450 684 aaKnown RBP18.97■□□□□ 0.63
CLDND1-220ENST00000508902 EP300Q09472 2414 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 FAM186AA6NE01 2351 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 SMTNL1A8MU46 457 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 NEDD8-MDP1E9PL57 170 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 CACNG3O60359 315 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 PENKP01210 267 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 CISD3P0C7P0 127 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 NCAM1P13591 858 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 HNRNPLP14866 589 aaKnown RBP eCLIP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 EIF2DP41214 584 aaKnown RBP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 GAD2Q05329 585 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 NR1H3Q13133 447 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 NFKBIBQ15653 356 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 EMC10Q5UCC4 262 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 NADSYN1Q6IA69 706 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 TRNP1Q6NT89 227 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 RNF139Q8WU17 664 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 FAM149B1Q96BN6 582 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 FAM122AQ96E09 287 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 SLC39A13Q96H72 371 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 SLC2A13Q96QE2 648 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 PCDHB18PQ96TA0 734 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 XPO7Q9UIA9 1087 aaKnown RBP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 STOML2Q9UJZ1 356 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 FBXO4Q9UKT5 387 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 STRIP2Q9ULQ0 834 aa18.96■□□□□ 0.63
CLDND1-220ENST00000508902 MUC22E2RYF6 1773 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-220ENST00000508902 A0A0A0MRY4 1105 aa18.95■□□□□ 0.62
CLDND1-220ENST00000508902 CHURC1-FNTBB4DL54 471 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms