RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 BICDL2A1A5D9 508 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 TIMM44O43615 452 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 GNA14O95837 355 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 PAEPP09466 180 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 SETSIPP0DME0 302 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 HARS2P49590 506 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 PGFP49763 221 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 YWHAGP61981 247 aaKnown RBP eCLIP14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 STARD3Q14849 445 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 EIF4HQ15056 248 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 MAP7D1Q3KQU3 841 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 LYSMD4Q5XG99 296 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 ANKRD40Q6AI12 368 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 PIGZQ86VD9 579 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 SCML4Q8N228 414 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 CPXM2Q8N436 756 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 PIGKQ92643 395 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 CHAMP1Q96JM3 812 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 IPO9Q96P70 1041 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 GABRG3Q99928 467 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 MARCH2Q9P0N8 246 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 RASAL2Q9UJF2 1139 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 INVSQ9Y283 1065 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 HBS1LQ9Y450 684 aaKnown RBP14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 GTF3C3Q9Y5Q9 886 aa14.26□□□□□ -0.13
CCHCR1-227ENST00000508852 TNRC6BQ9UPQ9 1833 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 LNP1A1A4G5 178 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 LATS1O95835 1130 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 PENKP01210 267 aaPredicted RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 BCKDHBP21953 392 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 CORO1AP31146 461 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 TKTL1P51854 596 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 MESP2Q0VG99 397 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 EFEMP1Q12805 493 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 CBWD6Q4V339 395 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 CBWD3Q5JTY5 395 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 CBWD5Q5RIA9 395 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 METTL3Q86U44 580 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 SIX6OS1Q8N1H7 587 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 ZNF557Q8N988 423 aaPredicted RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 IPO4Q8TEX9 1081 aaKnown RBP14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 RNF139Q8WU17 664 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 KCTD13Q8WZ19 329 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 TATDN2Q93075 761 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 WBP2Q969T9 261 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 SLC35C1Q96A29 364 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 NT5C1BQ96P26 610 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 CNGB3Q9NQW8 809 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 ABCC13Q9NSE7 274 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 TSPAN16Q9UKR8 245 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 ANGPTL2Q9UKU9 493 aa14.25□□□□□ -0.13
CCHCR1-227ENST00000508852 C4orf47A7E2U8 309 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 KCNK5O95279 499 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 FGFR1OPO95684 399 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 CISD3P0C7P0 127 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 CD19P15391 556 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 GABRG2P18507 467 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 CSRP1P21291 193 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 KCNA4P22459 653 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 RPL6Q02878 288 aaKnown RBP14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 PDE4CQ08493 712 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 DUOXA1Q1HG43 343 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 GOLGA7BQ2TAP0 167 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 CCDC40Q4G0X9 1142 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 TRIM61Q5EBN2 209 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 SYCP2LQ5T4T6 812 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 PEAR1Q5VY43 1037 aaPredicted RBP14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 EGFLAMQ63HQ2 1017 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 SMYD5Q6GMV2 418 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 SLC23A3Q6PIS1 610 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 ANKS1BQ7Z6G8 1248 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 SFTPA1Q8IWL2 248 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 GOLGA1Q92805 767 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 FOXJ1Q92949 421 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 EEF2KMTQ96G04 330 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 SUSD2Q9UGT4 822 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 NUDT5Q9UKK9 219 aa14.24□□□□□ -0.13
CCHCR1-227ENST00000508852 PI4KAP42356 2102 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 A0A1W2PQF6 199 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 SLC12A8A0AV02 714 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 MDM4O15151 490 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 NDUFS2O75306 463 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 CEACAM1P13688 526 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 FMO5P49326 533 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 ATXN3P54252 364 aaPredicted RBP14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 SHC2P98077 582 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 ARID5AQ03989 594 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 TRIP4Q15650 581 aaPredicted RBP14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 MPPE1Q53F39 396 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 FYB2Q5VWT5 728 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 LCLAT1Q6UWP7 414 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 FAM217AQ8IXS0 508 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 TMEFF1Q8IYR6 380 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 DDI1Q8WTU0 396 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 RLN3Q8WXF3 142 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 IRGQQ8WZA9 623 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 FAM81BQ96LP2 452 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 ARID3AQ99856 593 aa14.23□□□□□ -0.13
CCHCR1-227ENST00000508852 TRIM62Q9BVG3 475 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms