RNA–Protein interactions for RNA: ENST00000508841.1

GYPB-210, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 5

Gene GYPB, Length 610 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-210ENST00000508841 SNX18Q96RF0 628 aa6.84□□□□□ -1.31
GYPB-210ENST00000508841 SAYSD1Q9NPB0 183 aa6.84□□□□□ -1.31
GYPB-210ENST00000508841 FBXO28Q9NVF7 368 aa6.84□□□□□ -1.31
GYPB-210ENST00000508841 GRHPRQ9UBQ7 328 aa6.84□□□□□ -1.31
GYPB-210ENST00000508841 FNDC1Q4ZHG4 1894 aaPredicted RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 H7C1Q1 480 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 CTIFO43310 598 aaKnown RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 PIP5K1CO60331 668 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 HSD3B1P14060 373 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 VEGFAP15692 232 aaPredicted RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 GPD1P21695 349 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 AKT1P31749 480 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 PPM1FP49593 454 aaPredicted RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 DIO1P49895 249 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 LMAN2Q12907 356 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 BFSP2Q13515 415 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 GRM4Q14833 912 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 AKNAD1Q5T1N1 836 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 NFRKBQ6P4R8 1299 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 C12orf76Q8N812 135 aaPredicted RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 FAM71DQ8N9W8 422 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 SIMC1Q8NDZ2 872 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 PPM1EQ8WY54 764 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 PABPC3Q9H361 631 aaKnown RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 FSCN3Q9NQT6 498 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 PRDM8Q9NQV8 689 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 GAR1Q9NY12 217 aaKnown RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 SCAF8Q9UPN6 1271 aaKnown RBP6.83□□□□□ -1.32
GYPB-210ENST00000508841 DMRT1Q9Y5R6 373 aa6.83□□□□□ -1.32
GYPB-210ENST00000508841 DHRS4L1P0CG22 281 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 TMIGD3P0DMS9 266 aaPredicted RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 ITPKBP27987 946 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 PLA2G5P39877 138 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 ARL4CP56559 192 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 HOXA4Q00056 320 aaPredicted RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 PSG6Q00889 435 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 CFHR3Q02985 330 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 TMEM95Q3KNT9 176 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 SULT6B1Q6IMI4 303 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 GRHL2Q6ISB3 625 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 MSANTD2Q6P1R3 559 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 TRIM72Q6ZMU5 477 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 PIK3AP1Q6ZUJ8 805 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 SMAP1Q8IYB5 467 aaPredicted RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 CPXCR1Q8N123 301 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 TERB1Q8NA31 727 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 MYRIPQ8NFW9 859 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 SARAFQ96BY9 339 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 SDCCAG3Q96C92 435 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 DDX23Q9BUQ8 820 aaKnown RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 SORBS1Q9BX66 1292 aaKnown RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 RNF26Q9BY78 433 aaPredicted RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 CIPCQ9C0C6 399 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 KCNK9Q9NPC2 374 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 LPAR3Q9UBY5 353 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 C19orf53Q9UNZ5 99 aaPredicted RBP6.82□□□□□ -1.32
GYPB-210ENST00000508841 WNT6Q9Y6F9 365 aa6.82□□□□□ -1.32
GYPB-210ENST00000508841 BTBD19C9JJ37 291 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 HNRNPCP07910 306 aaKnown RBP eCLIP6.81□□□□□ -1.32
GYPB-210ENST00000508841 KLRK1P26718 216 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 CST5P28325 142 aaPredicted RBP6.81□□□□□ -1.32
GYPB-210ENST00000508841 IGHMBP2P38935 993 aaKnown RBP6.81□□□□□ -1.32
GYPB-210ENST00000508841 MCM2P49736 904 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 PPFIA1Q13136 1202 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 HSP90AB4PQ58FF6 505 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 SUMO4Q6EEV6 95 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 LIN54Q6MZP7 749 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 PCSK4Q6UW60 755 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 KIRREL2Q6UWL6 708 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 LDHAL6AQ6ZMR3 332 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 ZNF354CQ86Y25 554 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 ANKRD18AQ8IVF6 992 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 LINC01465Q8N7H1 131 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 OR52L2PQ8NGH6 319 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 CPT1BQ92523 772 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 RUBCNQ92622 972 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 FYTTD1Q96QD9 318 aaKnown RBP6.81□□□□□ -1.32
GYPB-210ENST00000508841 CPNE5Q9HCH3 593 aa6.81□□□□□ -1.32
GYPB-210ENST00000508841 ALG13Q9NP73 1137 aaKnown RBP6.81□□□□□ -1.32
GYPB-210ENST00000508841 MGST3O14880 152 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 PROP1O75360 226 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 RPP40O75818 363 aaKnown RBP6.8□□□□□ -1.32
GYPB-210ENST00000508841 DUSP1P28562 367 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 DEUP1Q05D60 604 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 BIRC3Q13489 604 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 POSTNQ15063 836 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 ADCK5Q3MIX3 580 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 TBRG1Q3YBR2 411 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 RNASE12Q5GAN4 147 aaKnown RBP6.8□□□□□ -1.32
GYPB-210ENST00000508841 ZNF569Q5MCW4 686 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 ACSM6Q6P461 480 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 NAPRTQ6XQN6 538 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 GLMPQ8WWB7 406 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 NELL1Q92832 810 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 REXO5Q96IC2 774 aaKnown RBP6.8□□□□□ -1.32
GYPB-210ENST00000508841 SORCS2Q96PQ0 1159 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 MMS19Q96T76 1030 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 SCAND2PQ9GZW5 306 aaPredicted RBP6.8□□□□□ -1.32
GYPB-210ENST00000508841 USP29Q9HBJ7 922 aa6.8□□□□□ -1.32
GYPB-210ENST00000508841 SEMA4GQ9NTN9 838 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms