RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 ACBD5Q5T8D3 534 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 TMEM139Q8IV31 216 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 SH3RF2Q8TEC5 729 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 RXFP2Q8WXD0 754 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 KHSRPQ92945 711 aaKnown RBP eCLIP20.93■□□□□ 0.94
USP53-203ENST00000507597 USP13Q92995 863 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 PGAP3Q96FM1 320 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 PIWIL1Q96J94 861 aaKnown RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 PPP1R9BQ96SB3 815 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 NUP85Q9BW27 656 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 KLF16Q9BXK1 252 aaPredicted RBP20.93■□□□□ 0.94
USP53-203ENST00000507597 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.93■□□□□ 0.94
USP53-203ENST00000507597 NUDT5Q9UKK9 219 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 TLR6Q9Y2C9 796 aa20.93■□□□□ 0.94
USP53-203ENST00000507597 E2F8A0AVK6 867 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 C2CD4BA6NLJ0 364 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 HEPACAM2A8MVW5 462 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 M0QYT0 321 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 LEFTY2O00292 366 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 BMP1P13497 986 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 CCR1P32246 355 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 RFC1P35251 1148 aaPredicted RBP20.92■□□□□ 0.94
USP53-203ENST00000507597 ZNF143P52747 638 aaPredicted RBP20.92■□□□□ 0.94
USP53-203ENST00000507597 DEUP1Q05D60 604 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 PIGHQ14442 188 aaPredicted RBP20.92■□□□□ 0.94
USP53-203ENST00000507597 IFI16Q16666 785 aaKnown RBP20.92■□□□□ 0.94
USP53-203ENST00000507597 PPP1R15BQ5SWA1 713 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 SYPL2Q5VXT5 272 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 RAD9BQ6WBX8 426 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 STRADAQ7RTN6 431 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 MFSD6LQ8IWD5 586 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.92■□□□□ 0.94
USP53-203ENST00000507597 OTUB2Q96DC9 234 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 NPY6RQ99463 290 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 DDX50Q9BQ39 737 aaKnown RBP20.92■□□□□ 0.94
USP53-203ENST00000507597 CNPY3Q9BT09 278 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 DDIT4Q9NX09 232 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 SMPD4Q9NXE4 827 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 IP6K2Q9UHH9 426 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 SFMBT1Q9UHJ3 866 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 BRWD1Q9NSI6 2320 aa20.92■□□□□ 0.94
USP53-203ENST00000507597 TCRBV5S1A1TA0A578 114 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 ANHXE9PGG2 379 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 LATS1O95835 1130 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 PSMC3P17980 439 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 RDXP35241 583 aaKnown RBP20.91■□□□□ 0.94
USP53-203ENST00000507597 FLT3P36888 993 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 VAV2P52735 878 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 KIF5AQ12840 1032 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 ARL13BQ3SXY8 428 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 ARHGAP29Q52LW3 1261 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 BRMS1LQ5PSV4 323 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 ATP6V0D2Q8N8Y2 350 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 ZNF564Q8TBZ8 553 aaPredicted RBP20.91■□□□□ 0.94
USP53-203ENST00000507597 RFFLQ8WZ73 363 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 NT5C3BQ969T7 300 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 SLC22A12Q96S37 553 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 NOTCH4Q99466 2003 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 TSGA10Q9BZW7 698 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 LIMD1Q9UGP4 676 aa20.91■□□□□ 0.94
USP53-203ENST00000507597 A0A0A6YYK5 440 aaPredicted RBP20.9■□□□□ 0.94
USP53-203ENST00000507597 TMEM191CA6NGB0 347 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 IRAK2O43187 625 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 CCDC175P0C221 793 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 PSMA2P25787 234 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 ARHGAP25P42331 645 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 NOP2P46087 812 aaKnown RBP20.9■□□□□ 0.94
USP53-203ENST00000507597 SLC11A2P49281 568 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 ZP2Q05996 745 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 NME3Q13232 169 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 MTF1Q14872 753 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 TANGO2Q6ICL3 276 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 PARM1Q6UWI2 310 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 HTR3DQ70Z44 454 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 TAC4Q86UU9 113 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 EMC1Q8N766 993 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 TTC16Q8NEE8 873 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 JOSD2Q8TAC2 188 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 AZIN2Q96A70 460 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 TRMT61BQ9BVS5 477 aaKnown RBP20.9■□□□□ 0.94
USP53-203ENST00000507597 WDCPQ9H6R7 721 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 CFAP97Q9P2B7 532 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 ANAPC7Q9UJX3 599 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 NUMBLQ9Y6R0 609 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 DENND4AQ7Z401 1863 aa20.9■□□□□ 0.94
USP53-203ENST00000507597 NRG2O14511 850 aaPredicted RBP20.89■□□□□ 0.93
USP53-203ENST00000507597 ZNF263O14978 683 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 MDM4O15151 490 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 ATMINO43313 823 aaPredicted RBP20.89■□□□□ 0.93
USP53-203ENST00000507597 IRF1P10914 325 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 CHKAP35790 457 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 VIPR2P41587 438 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 IFNAR2P48551 515 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 RPL7AP62424 266 aaKnown RBP20.89■□□□□ 0.93
USP53-203ENST00000507597 USP4Q13107 963 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 NR1H3Q13133 447 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 HTR4Q13639 388 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 PPP2R5DQ14738 602 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 TCEAL1Q15170 157 aa20.89■□□□□ 0.93
USP53-203ENST00000507597 PDGFRLQ15198 375 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms