RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 ZNF197O14709 1029 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 IRAK2O43187 625 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 CLUHO75153 1309 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 ENDOD1O94919 500 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 TCF4P15884 667 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 COMTP21964 271 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 HDAC4P56524 1084 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 EIF4EBP2Q13542 120 aaPredicted RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 CLUL1Q15846 466 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 IFI16Q16666 785 aaKnown RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 GPR158Q5T848 1215 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 SLFN11Q7Z7L1 901 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 DAAM2Q86T65 1068 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 ARL14EPQ8N8R7 260 aaPredicted RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 MAB21L3Q8N8X9 362 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 DOCK8Q8NF50 2099 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 PPM1EQ8WY54 764 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 PGAP3Q96FM1 320 aaPredicted RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 CALR3Q96L12 384 aaKnown RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 CYP2S1Q96SQ9 504 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 SLC46A2Q9BY10 475 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 FAM204AQ9H8W3 233 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 WDR6Q9NNW5 1121 aaKnown RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 PRDM6Q9NQX0 595 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 DDIT4Q9NX09 232 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 MARCH2Q9P0N8 246 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 COX16Q9P0S2 106 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 RASAL2Q9UJF2 1139 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 USTQ9Y2C2 406 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 MRPS23Q9Y3D9 190 aaKnown RBP14.79□□□□□ -0.04
RNF4-208ENST00000507247 ALG6Q9Y672 507 aa14.79□□□□□ -0.04
RNF4-208ENST00000507247 PRUNE2Q8WUY3 3088 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.78□□□□□ -0.04
RNF4-208ENST00000507247 LRCH4O75427 683 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 MAN1A1P33908 653 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 ATP5C1P36542 298 aaKnown RBP14.78□□□□□ -0.04
RNF4-208ENST00000507247 TAS2R40P59535 323 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 DEUP1Q05D60 604 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 NME3Q13232 169 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 KLHDC10Q6PID8 442 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 STRADAQ7RTN6 431 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 SMRP1Q8NCR6 262 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 PEBP4Q96S96 227 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 CDK5RAP1Q96SZ6 601 aaKnown RBP14.78□□□□□ -0.04
RNF4-208ENST00000507247 TASP1Q9H6P5 420 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 UBE2ZQ9H832 354 aaPredicted RBP14.78□□□□□ -0.04
RNF4-208ENST00000507247 PIGVQ9NUD9 493 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 LCMT1Q9UIC8 334 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 CD207Q9UJ71 328 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 DNMT3LQ9UJW3 386 aa14.78□□□□□ -0.04
RNF4-208ENST00000507247 SLC12A8A0AV02 714 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 H3BQ06 376 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 FTCDO95954 541 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 MBL2P11226 248 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 HDCP19113 662 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 FSHRP23945 695 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 DDX6P26196 483 aaKnown RBP eCLIP14.77□□□□□ -0.05
RNF4-208ENST00000507247 MIPP30301 263 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 RDXP35241 583 aaKnown RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 ZXDBP98169 803 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 ACAP1Q15027 740 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 SKIV2LQ15477 1246 aaKnown RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 ARHGAP15Q53QZ3 475 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 ZNF569Q5MCW4 686 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 ATAT1Q5SQI0 421 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 TXNRD3NBQ6F5E7 133 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 CES5AQ6NT32 575 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 CC2D1AQ6P1N0 951 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 CYP4V2Q6ZWL3 525 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 GET4Q7L5D6 327 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 TADA2BQ86TJ2 420 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 NT5DC3Q86UY8 548 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 FAM131BQ86XD5 332 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 MIB1Q86YT6 1006 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 SLC35F6Q8N357 371 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 TRIM58Q8NG06 486 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 SLC39A13Q96H72 371 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 ZFRQ96KR1 1074 aaKnown RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 FCRL2Q96LA5 508 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 ZSWIM3Q96MP5 696 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 SERPINB11Q96P15 392 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 KLF16Q9BXK1 252 aaPredicted RBP14.77□□□□□ -0.05
RNF4-208ENST00000507247 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.77□□□□□ -0.05
RNF4-208ENST00000507247 BRWD1Q9NSI6 2320 aa14.77□□□□□ -0.05
RNF4-208ENST00000507247 TRAV19A0A0A6YYK7 116 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 I6L893 689 aaPredicted RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 KIF5CO60282 957 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 RNF8O76064 485 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 IGLV3-27P01718 113 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 HMBSP08397 361 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 PFKLP17858 780 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 KCNA5P22460 613 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 MSNP26038 577 aaKnown RBP14.76□□□□□ -0.05
RNF4-208ENST00000507247 IL1R2P27930 398 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 GBP1P32455 592 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 PCK1P35558 622 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SLC1A1P43005 524 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 CXCR3P49682 368 aa14.76□□□□□ -0.05
RNF4-208ENST00000507247 SLC7A9P82251 487 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms