RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 FAM217AQ8IXS0 508 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CCDC33Q8N5R6 958 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 NAT16Q8N8M0 369 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TXNDC5Q8NBS9 432 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 RBBP8NLQ8NC74 664 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 TSTD1Q8NFU3 115 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 OLIG1Q8TAK6 271 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 UBA3Q8TBC4 463 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 NDRG1Q92597 394 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 BBS2Q9BXC9 721 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 INTS2Q9H0H0 1204 aaKnown RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 DUSP15Q9H1R2 295 aaPredicted RBP9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CLSTN2Q9H4D0 955 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 LRRC4Q9HBW1 653 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CD248Q9HCU0 757 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 CNGB3Q9NQW8 809 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 SEMA4GQ9NTN9 838 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 MARCH2Q9P0N8 246 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 WDR35Q9P2L0 1181 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 RASAL2Q9UJF2 1139 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 USP18Q9UMW8 372 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 ZNF510Q9Y2H8 683 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 STARD13Q9Y3M8 1113 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 DCHS1Q96JQ0 3298 aa9.51□□□□□ -0.89
PDLIM5-209ENST00000506632 NCOR2Q9Y618 2525 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 RALGAPA1Q6GYQ0 2036 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 TBC1D3BA6NDS4 549 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 YJEFN3A6XGL0 299 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 E7ENQ6 273 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 GFRA2O00451 464 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 MAP3K13O43283 966 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 CALCAP01258 141 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 BRD2P25440 801 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 CORO1AP31146 461 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 CHKAP35790 457 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 RPL34P49207 117 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 FOXK2Q01167 660 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 MEA1Q16626 185 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 RSPO4Q2I0M5 234 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 EOGTQ5NDL2 527 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PLA2G2CQ5R387 149 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 C10orf76Q5T2E6 689 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 FYB2Q5VWT5 728 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 BSPRYQ5W0U4 402 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 GRAMD4Q6IC98 578 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PMF1Q6P1K2 205 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 MSANTD2Q6P1R3 559 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PRR23CQ6ZRP0 262 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 TOGARAM2Q6ZUX3 1019 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 CPXM2Q8N436 756 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 ZNF513Q8N8E2 541 aaPredicted RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 MLKLQ8NB16 471 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 MDGA1Q8NFP4 955 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PLD4Q96BZ4 506 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 XPO6Q96QU8 1125 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 DCLK3Q9C098 648 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 OLA1Q9NTK5 396 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 DNAJC17Q9NVM6 304 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 AGO1Q9UL18 857 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 STRIP2Q9ULQ0 834 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC27A6Q9Y2P4 619 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PCDHGA5Q9Y5G8 931 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 ABCA7Q8IZY2 2146 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 PLXND1Q9Y4D7 1925 aa9.5□□□□□ -0.89
PDLIM5-209ENST00000506632 SPTBN2O15020 2390 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 SLC12A8A0AV02 714 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 GTPBP10A4D1E9 387 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 PRRT4C9JH25 899 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 M0QYV0 167 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 DCLK1O15075 740 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 FOXD2O60548 495 aaPredicted RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 SDHBP21912 280 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 GPD2P43304 727 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 DGKGP49619 791 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 RGS7P49802 495 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 EGFLAMQ63HQ2 1017 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 ANO7Q6IWH7 933 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 TRIM65Q6PJ69 517 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 NUDT18Q6ZVK8 323 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 RSRC2Q7L4I2 434 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 ENOSF1Q7L5Y1 443 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 TRMT11Q7Z4G4 463 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 SIX6OS1Q8N1H7 587 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 IRGQQ8WZA9 623 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 HSFY1Q96LI6 401 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 IPO9Q96P70 1041 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 GABRG3Q99928 467 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 TPSD1Q9BZJ3 242 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 ZDHHC4Q9NPG8 344 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 ABCC13Q9NSE7 274 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 PLK2Q9NYY3 685 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 STOML2Q9UJZ1 356 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 HBS1LQ9Y450 684 aaKnown RBP9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 DNAH14Q0VDD8 3507 aa9.49□□□□□ -0.89
PDLIM5-209ENST00000506632 A0A1W2PQF6 199 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 BECN2A8MW95 431 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 ALDH1A2O94788 518 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 FBXO21O94952 628 aa9.48□□□□□ -0.89
PDLIM5-209ENST00000506632 LATS1O95835 1130 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms