RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ATG4AQ8WYN0 398 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZBTB10Q96DT7 871 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 RNF31Q96EP0 1072 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 RRP36Q96EU6 259 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 HAPLN3Q96S86 360 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 EIF3CQ99613 913 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GPR20Q99678 358 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 REEP2Q9BRK0 252 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TEX101Q9BY14 249 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TPSD1Q9BZJ3 242 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GPR63Q9BZJ6 419 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 SERHL2Q9H4I8 314 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 CCDC134Q9H6E4 229 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 GALNT9Q9HCQ5 603 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRIM36Q9NQ86 728 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 LIN7CQ9NUP9 197 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMLHEQ9NVH6 421 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 INTS13Q9NVM9 706 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 NKX1-2Q9UD57 310 aaPredicted RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 KCND3Q9UK17 655 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 BAG5Q9UL15 447 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 RIMKLBQ9ULI2 386 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 DRG1Q9Y295 367 aaKnown RBP3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 ARHGAP5Q13017 1502 aa3.63□□□□□ -1.83
TRAPPC11-205ENST00000506426 TRGV11A0A075B6L2 103 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 SAC3D1A6NKF1 404 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZAR1LA6NP61 321 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 AHRRA9YTQ3 701 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 PSMD9O00233 223 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 EXOC5O00471 708 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 PPM1DO15297 605 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 SEPT4O43236 478 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZNF623O75123 536 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 RNASEH2AO75792 299 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZFPL1O95159 310 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 DDX58O95786 925 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM225BP0DP42 221 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 HTR7P34969 479 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 VAV2P52735 878 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 DGKQP52824 942 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 NR1H2P55055 460 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 RESTQ13127 1097 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 RRP1BQ14684 758 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 LY6KQ17RY6 165 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 GALNTL6Q49A17 601 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM196Q5HYL7 178 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 UBXN11Q5T124 520 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ATG16L1Q676U5 607 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC9A4Q6AI14 798 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 DGAT2L7PQ6IED9 249 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 MSANTD2Q6P1R3 559 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 CFAP161Q6P656 301 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 DTX2Q86UW9 622 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 LRRC71Q8N4P6 559 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 B3GALNT2Q8NCR0 500 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 FEZF2Q8TBJ5 459 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 Q8TCH9 128 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 RFFLQ8WZ73 363 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 OVCA2Q8WZ82 227 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ST8SIA4Q92187 359 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 NACC2Q96BF6 587 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 REXO5Q96IC2 774 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 PAAF1Q9BRP4 392 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ACTRT3Q9BYD9 372 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ALOXE3Q9BYJ1 711 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 PAIP1Q9H074 479 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 OSBPL5Q9H0X9 879 aaPredicted RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ZCCHC4Q9H5U6 513 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 GLOD4Q9HC38 313 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ALG13Q9NP73 1137 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 OLA1Q9NTK5 396 aaKnown RBP3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBC1D22BQ9NU19 505 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 TMEM74BQ9NUR3 256 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 ARHGAP26Q9UNA1 814 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 DNAJC16Q9Y2G8 782 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 MAP3K2Q9Y2U5 619 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 CFAP74Q9C0B2 1584 aa3.62□□□□□ -1.83
TRAPPC11-205ENST00000506426 PLCH2O75038 1416 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 C9orf84Q5VXU9 1444 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ARHGEF12Q9NZN5 1544 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 DIP2CQ9Y2E4 1556 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 DYTNA2CJ06 578 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 GRXCR1A8MXD5 290 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 PATE3B3GLJ2 98 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 KIAA0355O15063 1070 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 SLC16A3O15427 465 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CTIFO43310 598 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CBFA2T3O75081 653 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 TBX18O95935 607 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 DRD1P21728 446 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 MMP8P22894 467 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 PBX1P40424 430 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 MAGEA10P43363 369 aaPredicted RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 ATXN1P54253 815 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 CASP6P55212 293 aa3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 EIF4A1P60842 406 aaKnown RBP3.61□□□□□ -1.83
TRAPPC11-205ENST00000506426 SP2Q02086 613 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms