RNA–Protein interactions for RNA: ENST00000506063.1

TCOF1-208, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 4

Gene TCOF1, Length 526 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-208ENST00000506063 GUCY2FP51841 1108 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 HDAC4P56524 1084 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 LILRA4P59901 499 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 OSTNP61366 133 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CAMK2GQ13555 558 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF234Q14588 700 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 STARD3Q14849 445 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 DRAP1Q14919 205 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TAF12Q16514 161 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 GEN1Q17RS7 908 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 PERM1Q5SV97 790 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TMEM215Q68D42 235 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TCTN3Q6NUS6 607 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 CRTC1Q6UUV9 634 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 USP37Q86T82 979 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TP53INP2Q8IXH6 220 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 OXR1Q8N573 874 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 EFCAB3Q8N7B9 438 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 LEO1Q8WVC0 666 aaPredicted RBP3.58□□□□□ -1.84
TCOF1-208ENST00000506063 OTUB2Q96DC9 234 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 ARSGQ96EG1 525 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 SENP8Q96LD8 212 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 C5orf34Q96MH7 638 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 RANBP9Q96S59 729 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 EPAS1Q99814 870 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 KIFC3Q9BVG8 833 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 BTBD1Q9H0C5 482 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 PREBQ9HCU5 417 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 LATS2Q9NRM7 1088 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 WDR70Q9NW82 654 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 MARK1Q9P0L2 795 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 KCND3Q9UK17 655 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 PHTF1Q9UMS5 762 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TNFSF13BQ9Y275 285 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 TRPM6Q9BX84 2022 aa3.58□□□□□ -1.84
TCOF1-208ENST00000506063 ANK2Q01484 3957 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 A0A1W2PQ27 194 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 A0A1W2PQ64 194 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 A0A1W2PQC6 194 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 EME2A4GXA9 379 aaPredicted RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 TTLL8A6PVC2 850 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 hCG_1984214I3L0E3 225 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 K7ESM1 405 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 FFAR2O15552 330 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 LATO43561 262 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SLC37A4O43826 429 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 JAK2O60674 1132 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 PIAS2O75928 621 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SLITRK3O94933 977 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 LYPLA2O95372 231 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 CBX6O95503 412 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ITGB3P05106 788 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ACADMP11310 421 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 TYRP14679 529 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 CD1EP15812 388 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ITIH1P19827 911 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SDSP20132 328 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 FXR2P51116 673 aaKnown RBP eCLIP3.57□□□□□ -1.843e-6■■■■□ 22.9
TCOF1-208ENST00000506063 GALCP54803 685 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 RPS14P62263 151 aaKnown RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 LTBQ06643 244 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SPAG1Q07617 926 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SMARCB1Q12824 385 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF177Q13360 481 aaPredicted RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 CTTNQ14247 550 aaKnown RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 DHX8Q14562 1220 aaKnown RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ZRSR2Q15696 482 aaKnown RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SKOR2Q2VWA4 1001 aaPredicted RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ANO4Q32M45 955 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 NADK2Q4G0N4 442 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ARMCX5Q6P1M9 558 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 NCEH1Q6PIU2 408 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 RAB11FIP2Q7L804 512 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 TAS1R3Q7RTX0 852 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 CDH24Q86UP0 819 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 JAMLQ86YT9 394 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 REXO1Q8N1G1 1221 aaKnown RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 FBXO39Q8N4B4 442 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ZNF713Q8N859 430 aaPredicted RBP3.57□□□□□ -1.84
TCOF1-208ENST00000506063 MFSD2AQ8NA29 543 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 TEX19Q8NA77 164 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 Q8NA96 180 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 FANCBQ8NB91 859 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 GLIS1Q8NBF1 620 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 OR2T3Q8NH03 318 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 FAM174AQ8TBP5 190 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SCFD1Q8WVM8 642 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SORCS1Q8WY21 1168 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 NKD1Q969G9 470 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 CATSPER2Q96P56 530 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 TTLL2Q9BWV7 592 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 KRTAP17-1Q9BYP8 105 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ABCG4Q9H172 646 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 GLT8D2Q9H1C3 349 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 LHX5Q9H2C1 402 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 USP29Q9HBJ7 922 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 SGK2Q9HBY8 427 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 ABCB6Q9NP58 842 aa3.57□□□□□ -1.84
TCOF1-208ENST00000506063 KCNMB3Q9NPA1 279 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms