RNA–Protein interactions for RNA: ENST00000506042.5

SQSTM1-210, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 921 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-210ENST00000506042 PSMC2P35998 433 aaKnown RBP22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 ORC1Q13415 861 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 ANKS1BQ7Z6G8 1248 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 KIAA0895Q8NCT3 520 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 CADM4Q8NFZ8 388 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 PLEKHO2Q8TD55 490 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 PRCCQ92733 491 aaPredicted RBP22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 MRGPRX1Q96LB2 322 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 DUSP16Q9BY84 665 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 SLC2A11Q9BYW1 496 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 KCTD10Q9H3F6 313 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 OLA1Q9NTK5 396 aaKnown RBP22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 CACNA2D2Q9NY47 1150 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 RASAL2Q9UJF2 1139 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 WASF3Q9UPY6 502 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 STON1Q9Y6Q2 735 aa22.1■■□□□ 1.13
SQSTM1-210ENST00000506042 SPAARA0A1B0GVQ0 90 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 ANTXRLA6NF34 631 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 HYAL3O43820 417 aaPredicted RBP22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 CER1O95813 267 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 CD58P19256 250 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 GTF2H1P32780 548 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 KIF11P52732 1056 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 DLG4P78352 724 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 NFIL3Q16649 462 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 FAM186BQ8IYM0 893 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 ENGASEQ8NFI3 743 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 GATA6Q92908 595 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 BHMTQ93088 406 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 HEXIM2Q96MH2 286 aaKnown RBP22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 PI4KAP42356 2102 aa22.09■■□□□ 1.13
SQSTM1-210ENST00000506042 MYO18AQ92614 2054 aaKnown RBP22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 USP24Q9UPU5 2620 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 STC2O76061 302 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 YWHAEP62258 255 aaKnown RBP22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 KRT39Q6A163 491 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 PCED1AQ9H1Q7 454 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 TMEM8AQ9HCN3 771 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 HMGXB4Q9UGU5 601 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 RCOR1Q9UKL0 485 aa22.08■■□□□ 1.13
SQSTM1-210ENST00000506042 PRRT4C9JH25 899 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 ACTN4O43707 911 aaKnown RBP22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 KLRC4O43908 158 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 CILPO75339 1184 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 CMA1P23946 247 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 HARS2P49590 506 aaKnown RBP22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 TRIP6Q15654 476 aaKnown RBP22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 SPOPLQ6IQ16 392 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 Q6ZNB5 142 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 TOGARAM2Q6ZUX3 1019 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 GRAMD1CQ8IYS0 662 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 ZNF557Q8N988 423 aaPredicted RBP22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 PLD4Q96BZ4 506 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 SIPA1Q96FS4 1042 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 ACOX2Q99424 681 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 NUP58Q9BVL2 599 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 UBXN6Q9BZV1 441 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 PLK2Q9NYY3 685 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 ATP6V1DQ9Y5K8 247 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 RAD54BQ9Y620 910 aa22.07■■□□□ 1.12
SQSTM1-210ENST00000506042 TRIM24O15164 1050 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 NCAM1P13591 858 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 CORO1AP31146 461 aaKnown RBP22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 SYKP43405 635 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 GCLMP48507 274 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 KRT85P78386 507 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 EFEMP1Q12805 493 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 SERPINA13PQ6UXR4 307 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 GPRIN1Q7Z2K8 1008 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 SLC41A1Q8IVJ1 513 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 NAXDQ8IW45 347 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 CPXM2Q8N436 756 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 DDI1Q8WTU0 396 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 RNF139Q8WU17 664 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 SPATA32Q96LK8 384 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 CIPCQ9C0C6 399 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 MMRN2Q9H8L6 949 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 FBRSQ9HAH7 460 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 MARCH2Q9P0N8 246 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 HESX1Q9UBX0 185 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 FBXO10Q9UK96 956 aa22.06■■□□□ 1.12
SQSTM1-210ENST00000506042 HHLA1C9JL84 531 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 GREM1O60565 184 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 PENKP01210 267 aaPredicted RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 CISD3P0C7P0 127 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 EPB41P11171 864 aaKnown RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 PFKFB1P16118 471 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 SFSWAPQ12872 951 aaKnown RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 SUZ12Q15022 739 aaKnown RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 TEAD4Q15561 434 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 FUT11Q495W5 492 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 MPPE1Q53F39 396 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 WBP2Q969T9 261 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 TOE1Q96GM8 510 aaKnown RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 MIR1-1HGQ9H1L0 117 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 NMUR1Q9HB89 426 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 ITM2CQ9NQX7 267 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 THAP10Q9P2Z0 257 aaPredicted RBP22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 PLA2G4CQ9UP65 541 aa22.05■■□□□ 1.12
SQSTM1-210ENST00000506042 USP3Q9Y6I4 520 aa22.05■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms