RNA–Protein interactions for RNA: ENST00000505976.5

OTUD4-206, Transcript of OTU deubiquitinase 4, human

TSL 5

Gene OTUD4, Length 671 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
OTUD4-206	ENST00000505976	YWHAG	P61981	247 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	YWHAE	P62258	255 aa	Known RBP	18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	BST2	Q10589	180 aa	Known RBP	18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	EFEMP1	Q12805	493 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	STIM1	Q13586	685 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	PKDCC	Q504Y2	493 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	SGO2	Q562F6	1265 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	TTI2	Q6NXR4	508 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	CYP2U1	Q7Z449	544 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	SPACA7	Q96KW9	195 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	ACOX2	Q99424	681 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	ULBP1	Q9BZM6	244 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	DCLK3	Q9C098	648 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	PLK2	Q9NYY3	685 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	BCCIP	Q9P287	314 aa	Known RBP eCLIP	18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	GON4L	Q3T8J9	2241 aa		18.18	■□□□□ 0.5
OTUD4-206	ENST00000505976	ADAMTS9	Q9P2N4	1935 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	LNP1	A1A4G5	178 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	ZBED1	O96006	694 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	HMBS	P08397	361 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	VDR	P11473	427 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	TBXAS1	P24557	533 aa	Predicted RBP	18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	PPP1R2	P41236	205 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	WAS	P42768	502 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	SLC8A3	P57103	927 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	LRMP	Q12912	555 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	FYB2	Q5VWT5	728 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	FOXR2	Q6PJQ5	311 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	NDRG1	Q92597	394 aa	Known RBP	18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	BHMT	Q93088	406 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	GABRG3	Q99928	467 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	EDEM2	Q9BV94	578 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	MARCH2	Q9P0N8	246 aa		18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	AGO1	Q9UL18	857 aa	Known RBP	18.17	■□□□□ 0.5
OTUD4-206	ENST00000505976	PATE3	B3GLJ2	98 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	PPP1R3G	B7ZBB8	358 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976		O00370	1275 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	CHKA	P35790	457 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	DHPS	P49366	369 aa	Predicted RBP	18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	BYSL	Q13895	437 aa	Known RBP	18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	RNF43	Q68DV7	783 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	KIAA1211L	Q6NV74	962 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	LPCAT2	Q7L5N7	544 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	FAM217A	Q8IXS0	508 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	PGBD3	Q8N328	593 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	LMO3	Q8TAP4	145 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	LSM14B	Q9BX40	385 aa	Known RBP	18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	HESX1	Q9UBX0	185 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	SLC27A6	Q9Y2P4	619 aa		18.16	■□□□□ 0.5
OTUD4-206	ENST00000505976	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	SLC12A8	A0AV02	714 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	CD19	P15391	556 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	ADIG	Q0VDE8	80 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	MORC3	Q14149	939 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	TRIP4	Q15650	581 aa	Predicted RBP	18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	SPDYC	Q5MJ68	293 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	RSRC2	Q7L4I2	434 aa	Known RBP	18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	TMEFF1	Q8IYR6	380 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	CHPF	Q8IZ52	775 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	SCML4	Q8N228	414 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	CPXM2	Q8N436	756 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	UBA3	Q8TBC4	463 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	IPO4	Q8TEX9	1081 aa	Known RBP	18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	KCTD13	Q8WZ19	329 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	TFAP2B	Q92481	460 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	PLD4	Q96BZ4	506 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	NT5C1B	Q96P26	610 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	OLA1	Q9NTK5	396 aa	Known RBP	18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	CALCOCO1	Q9P1Z2	691 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	KIAA1257	Q9ULG3	409 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	STRIP2	Q9ULQ0	834 aa		18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	CIZ1	Q9ULV3	898 aa	Predicted RBP	18.15	■□□□□ 0.5
OTUD4-206	ENST00000505976	MUC22	E2RYF6	1773 aa	Predicted RBP	18.14	■□□□□ 0.5
OTUD4-206	ENST00000505976	ASCC3	Q8N3C0	2202 aa	Known RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	RNF225	M0QZC1	329 aa	Predicted RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	GFRA2	O00451	464 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	KHNYN	O15037	678 aa	Known RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	P4HA2	O15460	535 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	GADD45B	O75293	160 aa	Predicted RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	GABBR2	O75899	941 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	PAEP	P09466	180 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	SETSIP	P0DME0	302 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	NDUFV2	P19404	249 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	PTGER3	P43115	390 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	MFAP3	P55082	362 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	CCDC40	Q4G0X9	1142 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	PEAR1	Q5VY43	1037 aa	Predicted RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	KLHL10	Q6JEL2	608 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	LCLAT1	Q6UWP7	414 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	DENND1C	Q8IV53	801 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	NELFB	Q8WX92	580 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	PIGK	Q92643	395 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	KAT5	Q92993	513 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	CNTNAP3B	Q96NU0	1288 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	ZSWIM1	Q9BR11	485 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	CNTNAP3	Q9BZ76	1288 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	LRRC4	Q9HBW1	653 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	CACNA2D2	Q9NY47	1150 aa		18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	EVL	Q9UI08	416 aa	Predicted RBP	18.14	■□□□□ 0.49
OTUD4-206	ENST00000505976	PCDH15	Q96QU1	1955 aa		18.13	■□□□□ 0.49

Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms