RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 CALB1P05937 261 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SRGAP2BP0DMP2 458 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MYL4P12829 197 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TCF4P15884 667 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 FSHRP23945 695 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 NOS2P35228 1153 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PTPN9P43378 593 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 RING1Q06587 406 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 IFRD2Q12894 506 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 NNTQ13423 1086 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 VEPH1Q14D04 833 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TRIP4Q15650 581 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 GAB4Q2WGN9 574 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SLC25A52Q3SY17 297 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 EFHC1Q5JVL4 640 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 HECTD3Q5T447 861 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 DAB2IPQ5VWQ8 1189 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TANGO2Q6ICL3 276 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PTCRAQ6ISU1 281 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 CES5AQ6NT32 575 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PARM1Q6UWI2 310 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 VITQ6UXI7 678 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PHLDB2Q86SQ0 1253 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TAC4Q86UU9 113 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ARID3BQ8IVW6 561 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 REXO1L1PQ8IX06 675 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZNF683Q8IZ20 524 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZDHHC14Q8IZN3 488 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SIX6OS1Q8N1H7 587 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 NIPA2Q8N8Q9 360 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MAB21L3Q8N8X9 362 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZSCAN18Q8TBC5 510 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ATXN2LQ8WWM7 1075 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 EDEM1Q92611 657 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MYEOVQ96EZ4 313 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 CCDC42Q96M95 316 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 RIPOR3Q96MK2 946 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 CFAP57Q96MR6 1250 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZNF830Q96NB3 372 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PRMT1Q99873 361 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 FAM83CQ9BQN1 747 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 DESI2Q9BSY9 194 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SMG9Q9H0W8 520 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ATXN3LQ9H3M9 355 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TLR8Q9NR97 1041 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 METTL5Q9NRN9 209 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 GKN1Q9NS71 199 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PIGVQ9NUD9 493 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 EHD2Q9NZN4 543 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 WDR35Q9P2L0 1181 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZNF212Q9UDV6 495 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TRIM10Q9UDY6 481 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SFMBT1Q9UHJ3 866 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 XPO7Q9UIA9 1087 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 STRIP2Q9ULQ0 834 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MRPS23Q9Y3D9 190 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PCDHA13Q9Y5I0 950 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TECTAO75443 2155 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 VPS13AQ96RL7 3174 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 A0A0A6YYK5 440 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 STK25O00506 426 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZNF197O14709 1029 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SART1O43290 800 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MSI1O43347 362 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 AKR1B10O60218 316 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 LRCH4O75427 683 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 FGF19O95750 216 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TRUB2O95900 331 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MYBL1P10243 752 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 KRT3P12035 628 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 HDCP19113 662 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ABCB4P21439 1286 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 DDX6P26196 483 aaKnown RBP eCLIP5.16□□□□□ -1.582e-7■□□□□ 9.4
LMNB1-208ENST00000504788 IL1R2P27930 398 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 VIPR2P41587 438 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 CXCR3P49682 368 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 VAV2P52735 878 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ZNF143P52747 638 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SLC8A3P57103 927 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 GPC5P78333 572 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 CCDC173Q0VFZ6 552 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SEMA3BQ13214 749 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 C15orf59Q2T9L4 293 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 C5orf22Q49AR2 442 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 FAM133BQ5BKY9 247 aaKnown RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 GPR158Q5T848 1215 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 FAM102AQ5T9C2 384 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 MANEALQ5VSG8 457 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 TXNRD3NBQ6F5E7 133 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 NADSYN1Q6IA69 706 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 OR6B2Q6IFH4 312 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 PPP1R2P3Q6NXS1 205 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ELMSAN1Q6PJG2 1045 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 HTR3DQ70Z44 454 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 GET4Q7L5D6 327 aaPredicted RBP5.16□□□□□ -1.58
LMNB1-208ENST00000504788 SLFN11Q7Z7L1 901 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ELMOD1Q8N336 334 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 KIAA1958Q8N8K9 716 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 LRRC57Q8N9N7 239 aa5.16□□□□□ -1.58
LMNB1-208ENST00000504788 ST13P5Q8NFI4 369 aaPredicted RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms