RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 AGO1Q9UL18 857 aaKnown RBP14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 CLEC4EQ9ULY5 219 aa14.67□□□□□ -0.06
PDLIM7-211ENST00000504318 MED19A0JLT2 244 aaPredicted RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 PRR5-ARHGAP8B1AHC4 643 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 GDF9O60383 454 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 GNA14O95837 355 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 AFPP02771 609 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 CD19P15391 556 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 PTMSP20962 102 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 BCKDHBP21953 392 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 BRD2P25440 801 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 DGKEP52429 567 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 ARHGAP8P85298 464 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 ANO4Q32M45 955 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 EGFLAMQ63HQ2 1017 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 PMS2CLQ68D20 193 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 RNF43Q68DV7 783 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 TADA2BQ86TJ2 420 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 ARHGAP18Q8N392 663 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 CLEC4CQ8WTT0 213 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 BBS2Q9BXC9 721 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 TPSD1Q9BZJ3 242 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 DNAI2Q9GZS0 605 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 INTS2Q9H0H0 1204 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 ARRDC1-AS1Q9H2J1 176 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 DNAJC17Q9NVM6 304 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 MARCH2Q9P0N8 246 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 RASAL2Q9UJF2 1139 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 LSM7Q9UK45 103 aaKnown RBP14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 USP18Q9UMW8 372 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 PCDHB4Q9Y5E5 795 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 CEP192Q8TEP8 1941 aa14.66□□□□□ -0.06
PDLIM7-211ENST00000504318 GON4LQ3T8J9 2241 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 BECN2A8MW95 431 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 IGLV3-27P01718 113 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 FYNP06241 537 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 ZNF806P0C7X5 589 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CCDC192P0DO97 292 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CORO1AP31146 461 aaKnown RBP14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 P2RY2P41231 377 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 GPD2P43304 727 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 COG7P83436 770 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 FOXK2Q01167 660 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 APBA1Q02410 837 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 ENPP2Q13822 863 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CCDC6Q16204 474 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 MAP7D1Q3KQU3 841 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 C10orf76Q5T2E6 689 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 BSPRYQ5W0U4 402 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 GRAMD4Q6IC98 578 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 MSANTD2Q6P1R3 559 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CPXM2Q8N436 756 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 FRMD1Q8N878 549 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 ZNF513Q8N8E2 541 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 PIWIL1Q96J94 861 aaKnown RBP14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 GABRG3Q99928 467 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CLSTN2Q9H4D0 955 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CNGB3Q9NQW8 809 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 PLK2Q9NYY3 685 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 WDR35Q9P2L0 1181 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 CYTH4Q9UIA0 394 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 MBD1Q9UIS9 605 aaPredicted RBP14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 ZNF510Q9Y2H8 683 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 SLC27A6Q9Y2P4 619 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 PCDHGA5Q9Y5G8 931 aa14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.65□□□□□ -0.06
PDLIM7-211ENST00000504318 SLC12A8A0AV02 714 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 TBC1D3BA6NDS4 549 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 TM4SF5O14894 197 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 HMBSP08397 361 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 GABRG2P18507 467 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 RGS7P49802 495 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 MFAP3P55082 362 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 GOLGA8FQ08AF8 430 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 GOLGA8DPQ0D2H9 430 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 SF3A2Q15428 464 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 EOGTQ5NDL2 527 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 BTBD8Q5XKL5 378 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 KIAA1211LQ6NV74 962 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 GJB7Q6PEY0 223 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 TRIM65Q6PJ69 517 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 FMNL3Q8IVF7 1028 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 EDEM1Q92611 657 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 PLD4Q96BZ4 506 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 SMOC1Q9H4F8 434 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 SIX2Q9NPC8 291 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 ACP6Q9NPH0 428 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 HESX1Q9UBX0 185 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 SFMBT1Q9UHJ3 866 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 AJAP1Q9UKB5 411 aaPredicted RBP14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 INVSQ9Y283 1065 aa14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 CNOT1A5YKK6 2376 aaKnown RBP14.64□□□□□ -0.07
PDLIM7-211ENST00000504318 PI4KAP42356 2102 aa14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 BCLAF3A2AJT9 711 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 GOLGA6L22H0YM25 854 aa14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 M0QYV0 167 aa14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 SLC30A4O14863 429 aa14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 MSI1O43347 362 aaKnown RBP14.63□□□□□ -0.07
PDLIM7-211ENST00000504318 HOXD9P28356 352 aaPredicted RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms