RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 ATP6V1E2Q96A05 226 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM167AQ96KS9 214 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM161BQ96MY7 647 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PANX2Q96RD6 677 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 NAP1L4Q99733 375 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MED10Q9BTT4 135 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TARS2Q9BW92 718 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 XPO5Q9HAV4 1204 aaKnown RBP eCLIP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TMEM260Q9NX78 707 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 SAGE1Q9NXZ1 904 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZNF69Q9UC07 566 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 WARS2Q9UGM6 360 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ANAPC7Q9UJX3 599 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DBR1Q9UK59 544 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 POLHQ9Y253 713 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TPRP12270 2363 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZSWIM8A7E2V4 1837 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 POM121CA8CG34 1229 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GNGT2O14610 69 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 YKT6O15498 198 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GRIN3BO60391 1043 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PLA2G6O60733 806 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 EIF2AK2P19525 551 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MUTP22033 750 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 IL32P24001 234 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 STT3AP46977 705 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CDK7P50613 346 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 POLGP54098 1239 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DAB2P98082 770 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GRIN1Q05586 938 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 GALNT2Q10471 571 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CBX2Q14781 532 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MTERF2Q49AM1 385 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TIGD2Q4W5G0 525 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RABGAP1LQ5R372 815 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM83BQ5T0W9 1011 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 OLFML2BQ68BL8 750 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 IQSEC1Q6DN90 963 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 FAM180BQ6P0A1 224 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 EMBQ6PCB8 327 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CYP4V2Q6ZWL3 525 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 NLRP9Q7RTR0 991 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TRAPPC11Q7Z392 1133 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZER1Q7Z7L7 766 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CDH26Q8IXH8 852 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 THNSL1Q8IYQ7 743 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ANKRD53Q8N9V6 530 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TBC1D16Q8TBP0 767 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 WBP1Q96G27 269 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CEP170P1Q96L14 293 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 COG8Q96MW5 612 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 CATSPER2Q96P56 530 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 ZIM3Q96PE6 472 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 XPO6Q96QU8 1125 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 C11orf70Q9BRQ4 267 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM51Q9BSJ1 452 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 HOXD1Q9GZZ0 328 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MRM3Q9HC36 420 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 C12orf4Q9NQ89 552 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 KLHL11Q9NVR0 708 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 HACD3Q9P035 362 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PI4KBQ9UBF8 816 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 RWDD2AQ9UIY3 292 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJC12Q9UKB3 198 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 PCDHA4Q9UN74 947 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 REXO2Q9Y3B8 237 aaKnown RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 DAGLAQ9Y4D2 1042 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 MED23Q9ULK4 1368 aa3.8□□□□□ -1.8
PCDH11X-208ENST00000504220 POTEB3A0JP26 581 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 ZSCAN5BA6NJL1 495 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PRR5-ARHGAP8B1AHC4 643 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POTECB2RU33 542 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MATN2O00339 956 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SLC22A1O15245 554 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POLR2MP0CAP2 368 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SRGAP2CP0DJJ0 459 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CALB2P22676 271 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 DNAJB2P25686 324 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 MARK3P27448 753 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 HOXC12P31275 282 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 SHMT1P34896 483 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CPA2P48052 419 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CARSP49589 748 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NUMBP49757 651 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 OCRLQ01968 901 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RHAGQ02094 409 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 LRRC74AQ0VAA2 488 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 KCNH2Q12809 1159 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 NFE2Q16621 373 aaPredicted RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 CRY2Q49AN0 593 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 OR6B2Q6IFH4 312 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 POTEBQ6S5H4 581 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 TRIM67Q6ZTA4 783 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 METTL16Q86W50 562 aaKnown RBP3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 WDR49Q8IV35 697 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 RTKN2Q8IZC4 609 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 PPM1NQ8N819 430 aa3.79□□□□□ -1.8
PCDH11X-208ENST00000504220 GRK7Q8WTQ7 553 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms