RNA–Protein interactions for RNA: ENST00000504203.5

MATR3-233, Transcript of matrin 3, human

TSL 2 BASIC

Gene MATR3, Length 2,243 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MATR3-233	ENST00000504203	C12orf65	Q9H3J6	166 aa	Known RBP	13.52	□□□□□ -0.25
MATR3-233	ENST00000504203	CHKB	Q9Y259	395 aa		13.52	□□□□□ -0.25
MATR3-233	ENST00000504203	IPP	Q9Y573	584 aa		13.52	□□□□□ -0.25
MATR3-233	ENST00000504203	TRDMT1	O14717	391 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	XPO1	O14980	1071 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	TPSB2	P20231	275 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	WARS	P23381	471 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	LILRA4	P59901	499 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	RIPK1	Q13546	671 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	TPSAB1	Q15661	275 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	EFHC1	Q5JVL4	640 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	KCNT2	Q6UVM3	1135 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	SLC26A11	Q86WA9	606 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	ADGRF2	Q8IZF7	708 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	TOP6BL	Q8N6T0	577 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	CFAP36	Q96G28	342 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	APOPT1	Q96IL0	206 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	TNIP3	Q96KP6	325 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	HNRNPAB	Q99729	332 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	CD248	Q9HCU0	757 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	DTL	Q9NZJ0	730 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	ZC3H7B	Q9UGR2	993 aa	Known RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	ZNF180	Q9UJW8	692 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	IKBKG	Q9Y6K9	419 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	UNC5C	O95185	931 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	ATP6V1G2	O95670	118 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	GSTA2	P09210	222 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	HOXC8	P31273	242 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	CRYBB1	P53674	252 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	SLC25A52	Q3SY17	297 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	OTUD1	Q5VV17	481 aa	Predicted RBP	13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	BNIPL	Q7Z465	357 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	PIGZ	Q86VD9	579 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	VPS52	Q8N1B4	723 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	B3GALNT2	Q8NCR0	500 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	NT5C3B	Q969T7	300 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	KLHL29	Q96CT2	875 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	SIGLEC10	Q96LC7	697 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	OLFM3	Q96PB7	478 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	MYLK2	Q9H1R3	596 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	CPA4	Q9UI42	421 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	FZD10	Q9ULW2	581 aa		13.51	□□□□□ -0.25
MATR3-233	ENST00000504203	CXorf49	A8MYA2	514 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	LPXN	O60711	386 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	HUS1	O60921	280 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	DGKI	O75912	1065 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	GOT1	P17174	413 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	AMPD1	P23109	780 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	LRPAP1	P30533	357 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	PAQR9	Q6ZVX9	377 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	LRRC6	Q86X45	466 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	CHSY1	Q86X52	802 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	DEFB106A	Q8N104	65 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	PYROXD2	Q8N2H3	581 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	DUSP16	Q9BY84	665 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	DNAI2	Q9GZS0	605 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	SMYD2	Q9NRG4	433 aa		13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.5	□□□□□ -0.25
MATR3-233	ENST00000504203	WDR91	A4D1P6	747 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PTGES	O14684	152 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	HGS	O14964	777 aa	Predicted RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	APOE	P02649	317 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	CPT1A	P50416	773 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	SEMA5A	Q13591	1074 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	SEPT7	Q16181	437 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	UNC5A	Q6ZN44	842 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PSTK	Q8IV42	348 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PPM1N	Q8N819	430 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	ZNF398	Q8TD17	642 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PTPRN2	Q92932	1015 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	ERP27	Q96DN0	273 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	MANSC1	Q9H8J5	431 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	MFHAS1	Q9Y4C4	1052 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	GABRD	O14764	452 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	DAB1	O75553	588 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	DCTN3	O75935	186 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	BEST1	O76090	585 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	FAM163B	P0C2L3	166 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PYGB	P11216	843 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	VAV1	P15498	845 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	BEX3	Q00994	111 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	ADIG	Q0VDE8	80 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	SETDB1	Q15047	1291 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PLEKHG4	Q58EX7	1191 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	FAM131B	Q86XD5	332 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	NME8	Q8N427	588 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	KIF2B	Q8N4N8	673 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	KCTD13	Q8WZ19	329 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	NDRG1	Q92597	394 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PPP1R10	Q96QC0	940 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	LRRC37B	Q96QE4	947 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	EBNA1BP2	Q99848	306 aa	Known RBP	13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	PRDM16	Q9HAZ2	1276 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	NOD2	Q9HC29	1040 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	TRIM33	Q9UPN9	1127 aa		13.49	□□□□□ -0.25
MATR3-233	ENST00000504203	C17orf102	A2RUQ5	167 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	HACD1	B0YJ81	288 aa		13.48	□□□□□ -0.25
MATR3-233	ENST00000504203	TRIM49D1	C9J1S8	452 aa		13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms