RNA–Protein interactions for RNA: ENST00000504181.1

LSM6-204, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM6, Length 549 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-204ENST00000504181 ST3GAL1Q11201 340 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ENPP2Q13822 863 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ZNF234Q14588 700 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 ZSCAN23Q3MJ62 389 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 SCARA3Q6AZY7 606 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 PSMG3-AS1Q96PY0 264 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 DUSP9Q99956 384 aaKnown RBP13.28□□□□□ -0.28
LSM6-204ENST00000504181 TIPINQ9BVW5 301 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 LHX5Q9H2C1 402 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 POLR1BQ9H9Y6 1135 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 MARK1Q9P0L2 795 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 WDR35Q9P2L0 1181 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 KCNG1Q9UIX4 513 aa13.28□□□□□ -0.28
LSM6-204ENST00000504181 H0YCG3 227 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 GABRDO14764 452 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 YKT6O15498 198 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 PIGRP01833 764 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 EPHX1P07099 455 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 ACO1P21399 889 aaKnown RBP13.27□□□□□ -0.29
LSM6-204ENST00000504181 LMO2P25791 158 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 RACK1P63244 317 aaKnown RBP13.27□□□□□ -0.29
LSM6-204ENST00000504181 GEN1Q17RS7 908 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 HECTD3Q5T447 861 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 WASF1Q92558 559 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 EXTL1Q92935 676 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 FBXO32Q969P5 355 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 BTBD1Q9H0C5 482 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 WDR70Q9NW82 654 aa13.27□□□□□ -0.29
LSM6-204ENST00000504181 CHORDC1Q9UHD1 332 aaPredicted RBP13.27□□□□□ -0.29
LSM6-204ENST00000504181 NPHP3-ACAD11A0A0J9YXS1 232 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 PP2D1A8MPX8 630 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 TISP43B9A030 160 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 NPC1O15118 1278 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 CTDNEP1O95476 244 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 IGHV4-34P06331 123 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 FAM87AP0C7U9 286 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 FDPSP14324 419 aaKnown RBP13.26□□□□□ -0.29
LSM6-204ENST00000504181 PLCG1P19174 1290 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 CACNA2D1P54289 1103 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 E2F1Q01094 437 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 SOWAHAQ2M3V2 549 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 ARL13BQ3SXY8 428 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 TOP6BLQ8N6T0 577 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 PDZD8Q8NEN9 1154 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 UCMAQ8WVF2 138 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 PCED1BQ96HM7 432 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 FAM84AQ96KN4 292 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 C8orf48Q96LL4 319 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 DEPDC7Q96QD5 511 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 NACA2Q9H009 215 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 TMEM30AQ9NV96 361 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 CDH9Q9ULB4 789 aa13.26□□□□□ -0.29
LSM6-204ENST00000504181 CELSR2Q9HCU4 2923 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 CLEC18AA5D8T8 446 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 ANKRD63C9JTQ0 380 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 K7ENM7 598 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 CSO75390 466 aaKnown RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 PDGFRBP09619 1106 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 YWHAQP27348 245 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 ARRB1P49407 418 aaPredicted RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 RIPPLY3P57055 190 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 TFAMQ00059 246 aaKnown RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 GRIN1Q05586 938 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 MAPRE1Q15691 268 aaKnown RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 PROX2Q3B8N5 592 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 SGO2Q562F6 1265 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 MDH1BQ5I0G3 518 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 C3orf38Q5JPI3 329 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 SFMBT2Q5VUG0 894 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 ADALQ6DHV7 355 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 CLEC18BQ6UXF7 455 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 HTR3DQ70Z44 454 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 HS2ST1Q7LGA3 356 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 C1orf127Q8N9H9 656 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 CLEC18CQ8NCF0 446 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 OR2T3Q8NH03 318 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 SKA1Q96BD8 255 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 ZSWIM6Q9HCJ5 1215 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.25□□□□□ -0.29
LSM6-204ENST00000504181 GDF3Q9NR23 364 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 AASDHPPTQ9NRN7 309 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 GDAP2Q9NXN4 497 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 LARSQ9P2J5 1176 aaKnown RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 AGO2Q9UKV8 859 aaKnown RBP13.25□□□□□ -0.29
LSM6-204ENST00000504181 CYP46A1Q9Y6A2 500 aa13.25□□□□□ -0.29
LSM6-204ENST00000504181 SCN8AQ9UQD0 1980 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 A0A1W2PPC4 97 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 FAM47DPA6NHR8 397 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 GREM1O60565 184 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 KRT19P08727 400 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 MFAP3P55082 362 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 WNT7BP56706 349 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 SKOR1P84550 965 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 DAB2P98082 770 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 ZRSR1Q15695 479 aaKnown RBP13.24□□□□□ -0.29
LSM6-204ENST00000504181 CDCP2Q5VXM1 449 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 DIEXFQ68CQ4 756 aaKnown RBP13.24□□□□□ -0.29
LSM6-204ENST00000504181 KIAA0895LQ68EN5 471 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 SERPINA13PQ6UXR4 307 aa13.24□□□□□ -0.29
LSM6-204ENST00000504181 CSGALNACT2Q8N6G5 542 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms