RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 H0YC42 278 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ATP9AO75110 1047 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 DEAF1O75398 565 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SPAG6O75602 509 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 DNAJB5O75953 348 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 STAMBPO95630 424 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FAM86B2P0C5J1 330 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KRT3P12035 628 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SSTR3P32745 418 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SERPINB6P35237 376 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HOXD12P35452 270 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CLCNKAP51800 687 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TPD52P55327 224 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ACTR3P61158 418 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 STX1BP61266 288 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KCNJ2P63252 427 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 LPIN1Q14693 890 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CHRNA2Q15822 529 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 INF2Q27J81 1249 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ANKRD20A4Q4UJ75 823 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HERC4Q5GLZ8 1057 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLX4IPQ5VYV7 408 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 LDHAL6AQ6ZMR3 332 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RTN4RL1Q86UN2 441 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 UNC93AQ86WB7 457 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 BBS5Q8N3I7 341 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PCYOX1LQ8NBM8 494 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MCUQ8NE86 351 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PNPT1Q8TCS8 783 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CABLES1Q8TDN4 633 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLC7A3Q8WY07 619 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ZNF75CPQ92670 426 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RMDN1Q96DB5 314 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 THAP11Q96EK4 314 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PRMT1Q99873 361 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 WDR83Q9BRX9 315 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 OSBPL8Q9BZF1 889 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 VPS11Q9H270 941 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MMRN2Q9H8L6 949 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 WDR6Q9NNW5 1121 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NMRK1Q9NWW6 199 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SNTG2Q9NY99 539 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 GTF3C4Q9UKN8 822 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CCDC160A6NGH7 325 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 I6L893 689 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MDM4O15151 490 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SLC22A1O15245 554 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 THAP12O43422 761 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 XPOTO43592 962 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 IGF2P01344 180 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 KRT5P13647 590 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PRKCHP24723 683 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CTNNA2P26232 953 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ADSLP30566 484 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 EIF4A3P38919 411 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 OLR1P78380 273 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PLS1Q14651 629 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CNGA2Q16280 664 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 RALGPS1Q5JS13 557 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TRAPPC3LQ5T215 181 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MEI1Q5TIA1 1274 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SYDE2Q5VT97 1194 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FAAH2Q6GMR7 532 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TMEM53Q6P2H8 277 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 C14orf80Q86SX3 495 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CDR2LQ86X02 465 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 FBXO22Q8NEZ5 403 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 NSL1Q96IY1 281 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 MAGED4Q96JG8 741 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 PPP1R10Q96QC0 940 aaKnown RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 TTC1Q99614 292 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 SHCBP1LQ9BZQ2 653 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 ARMC1Q9NVT9 282 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 WRAP73Q9P2S5 460 aaPredicted RBP2.89□□□□□ -1.95
NEDD4-204ENST00000503468 CACNA1HO95180 2353 aa2.89□□□□□ -1.95
NEDD4-204ENST00000503468 A0A087WXM4 84 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 EVPLLA8MZ36 301 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KCNK3O14649 394 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KMOO15229 486 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 FARP2O94887 1054 aaPredicted RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PSMG1O95456 288 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 KRT16P08779 473 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RARAP10276 462 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 NAT2P11245 290 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 AXLP30530 894 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 HARS2P49590 506 aaKnown RBP2.88□□□□□ -1.95
NEDD4-204ENST00000503468 STX17P56962 302 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 UBXN2AP68543 259 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 MBTPS1Q14703 1052 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 PDK4Q16654 411 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 MMEL1Q495T6 779 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SPATS1Q496A3 300 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 MTERF2Q49AM1 385 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SGO2Q562F6 1265 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 RABGAP1LQ5R372 815 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SEL1L2Q5TEA6 688 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 SLC8B1Q6J4K2 584 aa2.88□□□□□ -1.95
NEDD4-204ENST00000503468 ALKBH5Q6P6C2 394 aaKnown RBP2.88□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms