RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 CPSF2Q9P2I0 782 aaKnown RBP25.35■■□□□ 1.65
DDX41-202ENST00000503078 A0A088AWK7 358 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 VDRP11473 427 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 PTPRAP18433 802 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 TCF7P36402 384 aaPredicted RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 CDC16Q13042 620 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 DBN1Q16643 649 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 BOLA3Q53S33 107 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 SLC9A4Q6AI14 798 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 AAGABQ6PD74 315 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 TIFABQ6ZNK6 161 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 WDR75Q8IWA0 830 aaKnown RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 LRRC71Q8N4P6 559 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 DDX50Q9BQ39 737 aaKnown RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 RPF1Q9H9Y2 349 aaKnown RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 GPATCH2LQ9NWQ4 482 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 PIK3R2O00459 728 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 IL18RAPO95256 599 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 MAP3K6O95382 1288 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 HIC1Q14526 733 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 NBPF12Q5TAG4 269 aaPredicted RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 C4orf22Q6V702 233 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 CATSPERGQ6ZRH7 1159 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 FAM183BPQ6ZVS7 135 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 ZNF534Q76KX8 674 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 ADGRG6Q86SQ4 1221 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 CDR2LQ86X02 465 aaPredicted RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 SLC25A41Q8N5S1 370 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 PCDH19Q8TAB3 1148 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 PPP1R14CQ8TAE6 165 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 PIWIL1Q96J94 861 aaKnown RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 HEXIM2Q96MH2 286 aaKnown RBP25.34■■□□□ 1.65
DDX41-202ENST00000503078 PICK1Q9NRD5 415 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 AFG3L2Q9Y4W6 797 aa25.34■■□□□ 1.65
DDX41-202ENST00000503078 MEI4A8MW99 385 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 ACKR2O00590 384 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 USP1O94782 785 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 C6orf222P0C671 652 aaPredicted RBP25.33■■□□□ 1.65
DDX41-202ENST00000503078 ZCCHC18P0CG32 403 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 EEF1DP3Q658K8 133 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 SCYL2Q6P3W7 929 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 DPH6Q7L8W6 267 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 TMEM192Q8IY95 271 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 TMEM130Q8N3G9 435 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 MPP5Q8N3R9 675 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 DEPDC1BQ8WUY9 529 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 PCDH18Q9HCL0 1135 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 PCDHA11Q9Y5I1 949 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 BUD23O43709 281 aaKnown RBP25.33■■□□□ 1.65
DDX41-202ENST00000503078 GRAP2O75791 330 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 TOP3BO95985 862 aaKnown RBP25.33■■□□□ 1.65
DDX41-202ENST00000503078 NFICP08651 508 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 TUBB3Q13509 450 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 TMEM132AQ24JP5 1023 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 FASTKD1Q53R41 847 aaKnown RBP25.33■■□□□ 1.65
DDX41-202ENST00000503078 GSTCDQ8NEC7 633 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 PIWIL2Q8TC59 973 aaKnown RBP25.33■■□□□ 1.65
DDX41-202ENST00000503078 PPP2R3CQ969Q6 453 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 FAM167AQ96KS9 214 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 CCDC28BQ9BUN5 200 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 APOL6Q9BWW8 343 aa25.33■■□□□ 1.65
DDX41-202ENST00000503078 B4GALT5O43286 388 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 ITGB3P05106 788 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 CCDC14Q49A88 953 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 LRRN4Q8WUT4 740 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 SEPT1Q8WYJ6 367 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 TUBGCP5Q96RT8 1024 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 STN1Q9H668 368 aaKnown RBP25.32■■□□□ 1.64
DDX41-202ENST00000503078 CYP3A43Q9HB55 503 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 S100A14Q9HCY8 104 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 GAS2O43903 313 aaKnown RBP25.32■■□□□ 1.64
DDX41-202ENST00000503078 METTL18O95568 372 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 TPSB2P20231 275 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 CNTFP26441 200 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 IRX4P78413 519 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 TPSAB1Q15661 275 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 EFHC1Q5JVL4 640 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 STXBP5Q5T5C0 1151 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 SESTD1Q86VW0 696 aa25.32■■□□□ 1.64
DDX41-202ENST00000503078 AP1G2O75843 785 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 GSRP00390 522 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 SLC25A3Q00325 362 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 MBLAC2Q68D91 279 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 CDKL3Q8IVW4 592 aaPredicted RBP25.31■■□□□ 1.64
DDX41-202ENST00000503078 JDP2Q8WYK2 163 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 USP6NLQ92738 828 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 ZNF778Q96MU6 729 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 MIS12Q9H081 205 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 CDT1Q9H211 546 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 FZD8Q9H461 694 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 DNAJC16Q9Y2G8 782 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 C19orf81C9J6K1 198 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 INO80B-WBP1J3KQ70 363 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 KLHL2O95198 593 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 PDE1BQ01064 536 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 DALRD3Q5D0E6 543 aaKnown RBP25.31■■□□□ 1.64
DDX41-202ENST00000503078 RABGAP1LQ5R372 815 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 DCAF15Q66K64 600 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 RAPH1Q70E73 1250 aa25.31■■□□□ 1.64
DDX41-202ENST00000503078 FAM172AQ8WUF8 416 aa25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms