RNA–Protein interactions for RNA: ENST00000498212.1

HMGXB4-207, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-207ENST00000498212 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 MARK1Q9P0L2 795 aa8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 MARCH2Q9P0N8 246 aa8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 CDV3Q9UKY7 258 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 STRIP2Q9ULQ0 834 aa8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 ZNF510Q9Y2H8 683 aa8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 DCHS1Q96JQ0 3298 aa8.89□□□□□ -0.99
HMGXB4-207ENST00000498212 DMXL1Q9Y485 3027 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 ZNF292O60281 2723 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 EP300Q09472 2414 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 GVINP1Q7Z2Y8 2422 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 SLC12A8A0AV02 714 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 M0QYV0 167 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 RNF225M0QZC1 329 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 DCLK1O15075 740 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 TRIM24O15164 1050 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 FOXD2O60548 495 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 RHOBTB1O94844 696 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 AFPP02771 609 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 KLKB1P03952 638 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 HMBSP08397 361 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 LCP1P13796 627 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 HNRNPLP14866 589 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 GBP1P32455 592 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 DGKGP49619 791 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 GCNT1Q02742 428 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 STILQ15468 1287 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 CNGA2Q16280 664 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 PKDCCQ504Y2 493 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 USP39Q53GS9 565 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 LCLAT1Q6UWP7 414 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 RRAGAQ7L523 313 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 BHLHA9Q7RTU4 235 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 ARHGEF19Q8IW93 802 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 SIX6OS1Q8N1H7 587 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 SCML4Q8N228 414 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 RBBP8NLQ8NC74 664 aaPredicted RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 EHBP1Q8NDI1 1231 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 KCNV2Q8TDN2 545 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 KCTD13Q8WZ19 329 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 TFAP2BQ92481 460 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 NDRG1Q92597 394 aaKnown RBP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 KAT5Q92993 513 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 BHMTQ93088 406 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 PLD4Q96BZ4 506 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 CNGB3Q9NQW8 809 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 PLK2Q9NYY3 685 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 RWDD2AQ9UIY3 292 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 INVSQ9Y283 1065 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 PCDHGA5Q9Y5G8 931 aa8.88□□□□□ -0.99
HMGXB4-207ENST00000498212 CKAP5Q14008 2032 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 TCRBV21S2A2A0A5A6 115 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 YJEFN3A6XGL0 299 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 E7ENQ6 273 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ADAM23O75077 832 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ZNF806P0C7X5 589 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 BRD2P25440 801 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 NTSR1P30989 418 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 MPLP40238 635 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 RGS7P49802 495 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ATXN1P54253 815 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 DAOAP59103 153 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 CCDC6Q16204 474 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 AASDHQ4L235 1098 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 BSPRYQ5W0U4 402 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 PMS2CLQ68D20 193 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 PMF1Q6P1K2 205 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 TOGARAM2Q6ZUX3 1019 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 C11orf74Q86VG3 221 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 CREBRFQ8IUR6 639 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 DENND1CQ8IV53 801 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 C12orf50Q8NA57 414 aaPredicted RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 NETO1Q8TDF5 533 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 RNF139Q8WU17 664 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 SLC35F5Q8WV83 523 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 HMGB4Q8WW32 186 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 EDEM1Q92611 657 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ZSWIM1Q9BR11 485 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 RTKNQ9BST9 563 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 INTS2Q9H0H0 1204 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ABCC13Q9NSE7 274 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 BCCIPQ9P287 314 aaKnown RBP eCLIP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 SFMBT1Q9UHJ3 866 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 AGO1Q9UL18 857 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 STARD13Q9Y3M8 1113 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 ADAMTS9Q9P2N4 1935 aa8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 NYNRINQ9P2P1 1898 aaKnown RBP8.87□□□□□ -0.99
HMGXB4-207ENST00000498212 PRRT4C9JH25 899 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 PIK3R2O00459 728 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 GDF9O60383 454 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 PENKP01210 267 aaPredicted RBP8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 CALCAP01258 141 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 CYBBP04839 570 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 CISD3P0C7P0 127 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 HOXB2P14652 356 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 BCKDHBP21953 392 aa8.86□□□□□ -0.99
HMGXB4-207ENST00000498212 P2RY2P41231 377 aa8.86□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms