RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 CCSER2Q9H7U1 834 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 TRPV4Q9HBA0 871 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 OSER1Q9NX31 292 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 SLC12A6Q9UHW9 1150 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 RASAL2Q9UJF2 1139 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 LSM7Q9UK45 103 aaKnown RBP18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 ZNF510Q9Y2H8 683 aa18.32■□□□□ 0.52
CTDSP1-215ENST00000498160 CDH23Q9H251 3354 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 C2orf78A6NCI8 922 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 IRAK2O43187 625 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 ENDOD1O94919 500 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 IGLV3-25P01717 112 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 GBP2P32456 591 aaPredicted RBP18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 RDXP35241 583 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 SLC1A1P43005 524 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 RPL7AP62424 266 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 CLUL1Q15846 466 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 BRMS1LQ5PSV4 323 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 PHLDB2Q86SQ0 1253 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 SYCE1Q8N0S2 351 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 CELF5Q8N6W0 485 aaKnown RBP18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 SMARCD2Q92925 531 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 NXPE3Q969Y0 559 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 SLC46A2Q9BY10 475 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 TDP1Q9NUW8 608 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.31■□□□□ 0.521e-8■■■■■ 33.1
CTDSP1-215ENST00000498160 DDIT4Q9NX09 232 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 EPS15L1Q9UBC2 864 aa18.31■□□□□ 0.52
CTDSP1-215ENST00000498160 GRXCR2A6NFK2 248 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 M0QYT0 321 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 LATS1O95835 1130 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 APOEP02649 317 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 GJA1P17302 382 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 MSNP26038 577 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 CCR1P32246 355 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 NAP1L1P55209 391 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 DEUP1Q05D60 604 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 PPP2R5DQ14738 602 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 ARL13BQ3SXY8 428 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 CCDC14Q49A88 953 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 SYPL2Q5VXT5 272 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 PTCRAQ6ISU1 281 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 TAC4Q86UU9 113 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 DNAAF5Q86Y56 855 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 EMC1Q8N766 993 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 ARL14EPQ8N8R7 260 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 TDRD5Q8NAT2 981 aaKnown RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 ZSCAN18Q8TBC5 510 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 ING5Q8WYH8 240 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 CENPIQ92674 756 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 CFAP57Q96MR6 1250 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 ZNF830Q96NB3 372 aaPredicted RBP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 PRKAG3Q9UGI9 489 aa18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.3■□□□□ 0.52
CTDSP1-215ENST00000498160 SLC12A8A0AV02 714 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 FAM170AA1A519 330 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 PROSCO94903 275 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 LAMP2P13473 410 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 PCK1P35558 622 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 HARS2P49590 506 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 PGFP49763 221 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 TBX4P57082 545 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 HADHQ16836 314 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 C11orf63Q6NUN7 778 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 BNIPLQ7Z465 357 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 ARID3BQ8IVW6 561 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 AZIN2Q96A70 460 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 ASB16Q96NS5 453 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 DDX50Q9BQ39 737 aaKnown RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 KLF16Q9BXK1 252 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 IRX2Q9BZI1 471 aaPredicted RBP18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 ZFP14Q9HCL3 533 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 KCND1Q9NSA2 647 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 SH3BP1Q9Y3L3 701 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 CPQQ9Y646 472 aa18.29■□□□□ 0.52
CTDSP1-215ENST00000498160 HELZP42694 1942 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 SLC9A3R1O14745 358 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 CXCR3P49682 368 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 EIF4EBP2Q13542 120 aaPredicted RBP18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 MIB1Q86YT6 1006 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 PSTKQ8IV42 348 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 ZDHHC14Q8IZN3 488 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 ATP6V0D2Q8N8Y2 350 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 FAM172AQ8WUF8 416 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 DEPDC1BQ8WUY9 529 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 ATXN2LQ8WWM7 1075 aaKnown RBP18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 RNF34Q969K3 372 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 OTUB2Q96DC9 234 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 TBCBQ99426 244 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 LACRTQ9GZZ8 138 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 RNF38Q9H0F5 515 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 OSGEPQ9NPF4 335 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 TBC1D14Q9P2M4 693 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 SFMBT1Q9UHJ3 866 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 BRWD1Q9NSI6 2320 aa18.28■□□□□ 0.52
CTDSP1-215ENST00000498160 E2F8A0AVK6 867 aa18.27■□□□□ 0.52
CTDSP1-215ENST00000498160 RCCD1A6NED2 376 aa18.27■□□□□ 0.52
CTDSP1-215ENST00000498160 ECI2O75521 394 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms