RNA–Protein interactions for RNA: ENST00000497544.2

CTSD-206, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 783 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-206ENST00000497544 CCDC112Q8NEF3 446 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 ZSCAN18Q8TBC5 510 aaPredicted RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 PIWIL1Q96J94 861 aaKnown RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 RNF38Q9H0F5 515 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 CNOT8Q9UFF9 292 aaKnown RBP20.94■□□□□ 0.94
CTSD-206ENST00000497544 NENFQ9UMX5 172 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 DENND4AQ7Z401 1863 aa20.94■□□□□ 0.94
CTSD-206ENST00000497544 CHD8Q9HCK8 2581 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 ANKRD62A6NC57 917 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 EIF3CLB5ME19 914 aaKnown RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 COCHO43405 550 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 NDUFA10O95299 355 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 TBX18O95935 607 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 CKMP06732 381 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 KRT3P12035 628 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 RRM1P23921 792 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 GSCP56915 257 aaPredicted RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 GPC5P78333 572 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 CCDC173Q0VFZ6 552 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 DNAJC24Q6P3W2 148 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 BEND5Q7L4P6 421 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 TMEM139Q8IV31 216 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 DEFB106AQ8N104 65 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 TDRD5Q8NAT2 981 aaKnown RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 EIF3CQ99613 913 aaKnown RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 LUC7LQ9NQ29 371 aaKnown RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 METTL5Q9NRN9 209 aaKnown RBP20.93■□□□□ 0.94
CTSD-206ENST00000497544 PARVAQ9NVD7 372 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 MYO1AQ9UBC5 1043 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 DNMT3LQ9UJW3 386 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 NAALADL1Q9UQQ1 740 aa20.93■□□□□ 0.94
CTSD-206ENST00000497544 MYO10Q9HD67 2058 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 SIGLEC16A6NMB1 481 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 DPYSL4O14531 572 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 MAGEA1P43355 309 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 EFEMP1Q12805 493 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 MTF1Q14872 753 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 DCAF6Q58WW2 860 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 DCUN1D2Q6PH85 259 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 KLHDC10Q6PID8 442 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 POTEHQ6S545 545 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 RAD9BQ6WBX8 426 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 KIAA2013Q8IYS2 634 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 CTNNBL1Q8WYA6 563 aaPredicted RBP20.92■□□□□ 0.94
CTSD-206ENST00000497544 SMARCD2Q92925 531 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 SLC2A13Q96QE2 648 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 SLC22A12Q96S37 553 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 THAP2Q9H0W7 228 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 MRPL47Q9HD33 250 aaKnown RBP20.92■□□□□ 0.94
CTSD-206ENST00000497544 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.92■□□□□ 0.94
CTSD-206ENST00000497544 RASAL2Q9UJF2 1139 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 TMEM59LQ9UK28 342 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 ATRXP46100 2492 aa20.92■□□□□ 0.94
CTSD-206ENST00000497544 C2CD4DB7Z1M9 353 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 DAB1O75553 588 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 LCA5LO95447 670 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 FYNP06241 537 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 WEE1P30291 646 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 NOS2P35228 1153 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 MATKP42679 507 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 SLC7A9P82251 487 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 FAM78AQ5JUQ0 283 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 SYPL2Q5VXT5 272 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 PLEKHA7Q6IQ23 1121 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 ARCQ7LC44 396 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 ASB16Q96NS5 453 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 ZFP14Q9HCL3 533 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 TDP1Q9NUW8 608 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 EPS15L1Q9UBC2 864 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 SCINQ9Y6U3 715 aa20.91■□□□□ 0.94
CTSD-206ENST00000497544 USP24Q9UPU5 2620 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 TCRBV5S1A1TA0A578 114 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 ZNF263O14978 683 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 MDM4O15151 490 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 ATMINO43313 823 aaPredicted RBP20.9■□□□□ 0.94
CTSD-206ENST00000497544 OLFM2O95897 454 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 MSANTD2Q6P1R3 559 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 DDX23Q9BUQ8 820 aaKnown RBP20.9■□□□□ 0.94
CTSD-206ENST00000497544 PACSIN1Q9BY11 444 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 SMG9Q9H0W8 520 aaKnown RBP20.9■□□□□ 0.94
CTSD-206ENST00000497544 SMPD4Q9NXE4 827 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 RRN3Q9NYV6 651 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 MARCH2Q9P0N8 246 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 SFMBT1Q9UHJ3 866 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 INTUQ9ULD6 942 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 STAP1Q9ULZ2 295 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 PCDHA13Q9Y5I0 950 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 CPQQ9Y646 472 aa20.9■□□□□ 0.94
CTSD-206ENST00000497544 SLC12A8A0AV02 714 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 ARHGAP6O43182 974 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 GJB6O95452 261 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 PDGFRAP16234 1089 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 GBP1P32455 592 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 RFC1P35251 1148 aaPredicted RBP20.89■□□□□ 0.93
CTSD-206ENST00000497544 KRT83P78385 493 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 COG7P83436 770 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 MAMLD1Q13495 774 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 ST3GAL2Q16842 350 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 MTSS1LQ765P7 747 aa20.89■□□□□ 0.93
CTSD-206ENST00000497544 MIB1Q86YT6 1006 aa20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms