RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 METTL23Q86XA0 190 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 FBXL6Q8N531 539 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 ZBTB8BQ8NAP8 495 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-224ENST00000497488 POGLUT1Q8NBL1 392 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 FAM46DQ8NEK8 389 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 UTP15Q8TED0 518 aaKnown RBP6.51□□□□□ -1.37
BRCA1-224ENST00000497488 GRK7Q8WTQ7 553 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 TAF4BQ92750 862 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 SCAMP4Q969E2 229 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 EXOC4Q96A65 974 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 SLC22A18Q96BI1 424 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 KIF1BPQ96EK5 621 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 GBP5Q96PP8 586 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 ABHD1Q96SE0 405 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 TACO1Q9BSH4 297 aaKnown RBP6.51□□□□□ -1.37
BRCA1-224ENST00000497488 HERC2P3Q9BVR0 1158 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 TEX12Q9BXU0 123 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 SLC46A2Q9BY10 475 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 TTYH1Q9H313 450 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-224ENST00000497488 KCND2Q9NZV8 630 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 BAG5Q9UL15 447 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 PRXQ9BXM0 1461 aa6.51□□□□□ -1.37
BRCA1-224ENST00000497488 IQGAP2Q13576 1575 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 A0A0U1RQK1 487 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF320A2RRD8 509 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 SLC38A8A6NNN8 435 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 PLOD2O00469 737 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 GNB5O14775 395 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 BCAT2O15382 392 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CHEK2O96017 543 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CYBBP04839 570 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 SNRNP70P08621 437 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 WEE2P0C1S8 567 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 GYPEP15421 78 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 FDXRP22570 491 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 PRKCHP24723 683 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 TCF7P36402 384 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ARL1P40616 181 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CAPZA2P47755 286 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF132P52740 706 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CDH15P55291 814 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 HDAC4P56524 1084 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 C17orf67Q0P5P2 114 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 TCF15Q12870 199 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 EIF2B5Q13144 721 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CSHL1Q14406 222 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 NTRK2Q16620 822 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 TBRG1Q3YBR2 411 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF805Q5CZA5 627 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 KLHL35Q6PF15 583 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 DPP8Q6V1X1 898 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 PLPPR4Q7Z2D5 763 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 PPP1R32Q7Z5V6 425 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 LINC00346Q8IVM7 164 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CCAR2Q8N163 923 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 MDM1Q8TC05 714 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ABHD5Q8WTS1 349 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ASB11Q8WXH4 323 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 KRT35Q92764 455 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 RMDN1Q96DB5 314 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 PPP1R10Q96QC0 940 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 LBHD1Q9BQE6 289 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 FSD1Q9BTV5 496 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 NDC1Q9BTX1 674 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 THUMPD3Q9BV44 507 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 KLHL4Q9C0H6 718 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 SIK2Q9H0K1 926 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ADAMTS10Q9H324 1103 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 DLL4Q9NR61 685 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ING3Q9NXR8 418 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 COQ3Q9NZJ6 369 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 EHD2Q9NZN4 543 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 POGKQ9P215 609 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 CPSF2Q9P2I0 782 aaKnown RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 ZNF70Q9UC06 446 aaPredicted RBP6.5□□□□□ -1.37
BRCA1-224ENST00000497488 COG5Q9UP83 839 aa6.5□□□□□ -1.37
BRCA1-224ENST00000497488 A0A0G2JNJ9 132 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 HMX2A2RU54 273 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SH2D7A6NKC9 451 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 F8W031 263 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 H0YAE9 185 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SEC14L2O76054 403 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 KIF20AO95235 890 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 RASAL1O95294 804 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 EIF2S1P05198 315 aaKnown RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 TMIGD3P0DMS9 266 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 KCNA2P16389 499 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 CDH2P19022 906 aaPredicted RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SAT1P21673 171 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ADCY8P40145 1251 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 GLRBP48167 497 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 LMAN1P49257 510 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 PTTG1IPP53801 180 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 EIF4A1P60842 406 aaKnown RBP6.49□□□□□ -1.37
BRCA1-224ENST00000497488 ADAM17P78536 824 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 CHRNEQ04844 493 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 COASYQ13057 564 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 DUSP8Q13202 625 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 SLC14A1Q13336 389 aa6.49□□□□□ -1.37
BRCA1-224ENST00000497488 BOP1Q14137 746 aaKnown RBP6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms